RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 OR1A1Q9P1Q5 309 aa5.32□□□□□ -1.56
LINC00871-204ENST00000556886 IL19Q9UHD0 177 aa5.32□□□□□ -1.56
LINC00871-204ENST00000556886 JPT1Q9UK76 154 aa5.32□□□□□ -1.56
LINC00871-204ENST00000556886 ZNF835Q9Y2P0 537 aa5.32□□□□□ -1.56
LINC00871-204ENST00000556886 KPTNQ9Y664 436 aa5.32□□□□□ -1.56
LINC00871-204ENST00000556886 CACNA1BQ00975 2339 aa5.32□□□□□ -1.56
LINC00871-204ENST00000556886 IGSF23A1L1A6 192 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 F8W036 122 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 C15orf65H3BRN8 121 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 K7N7A8 449 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 ABCD4O14678 606 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 RAB29O14966 203 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 RBFOX2O43251 390 aaKnown RBP eCLIP5.31□□□□□ -1.56
LINC00871-204ENST00000556886 TXNL1O43396 289 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 SOX15O60248 233 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 NDUFS6O75380 124 aaKnown RBP5.31□□□□□ -1.56
LINC00871-204ENST00000556886 IFNA5P01569 189 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 CD55P08174 381 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 SNCAP37840 140 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 KIR2DS2P43631 304 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 LPAR6P43657 344 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 CAMLGP49069 296 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 TDGF1P3P51864 188 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 PAX9P55771 341 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 RAB2AP61019 212 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 HBG1P69891 147 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 HBG2P69892 147 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 ESPL1Q14674 2120 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 ATP6V1FQ16864 119 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 ZNF876PQ49A33 203 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 PRAMEF6Q5VXH4 476 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 KRTAP5-11Q6L8G4 156 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 ZNF826PQ6ZT77 177 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 ZNF561Q8N587 486 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 OR2Z1Q8NG97 314 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 OR51H1Q8NH63 302 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 RNASE11Q8TAA1 199 aaKnown RBP5.31□□□□□ -1.56
LINC00871-204ENST00000556886 SDSLQ96GA7 329 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 NARS2Q96I59 477 aaKnown RBP5.31□□□□□ -1.56
LINC00871-204ENST00000556886 DUX3Q96PT4 197 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 CIB3Q96Q77 187 aaPredicted RBP5.31□□□□□ -1.56
LINC00871-204ENST00000556886 ATP5SQ99766 215 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 TREM1Q9NP99 234 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.31□□□□□ -1.56
LINC00871-204ENST00000556886 C19orf12Q9NSK7 152 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 PPP1R3CQ9UQK1 317 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 ANKRD11Q6UB99 2663 aaPredicted RBP5.31□□□□□ -1.56
LINC00871-204ENST00000556886 WDFY3Q8IZQ1 3526 aa5.31□□□□□ -1.56
LINC00871-204ENST00000556886 GTF3C1Q12789 2109 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 TRAV1-1A0A0B4J248 108 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 ODAMA1E959 279 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 K7ENP7 123 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 M0R1B8 84 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 DNASE2O00115 360 aaPredicted RBP5.3□□□□□ -1.56
LINC00871-204ENST00000556886 SSSCA1O60232 199 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 ZG16O60844 167 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 SCO1O75880 301 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 IGKV1-39P01597 117 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 IGKV1-5P01602 117 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 PRH1P02810 166 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 IGKV1D-39P04432 117 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 P0C879 139 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 CGB3P0DN86 165 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 CGB7P0DN87 165 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 MUC1P15941 1255 aaPredicted RBP5.3□□□□□ -1.56
LINC00871-204ENST00000556886 ATP6V0CP27449 155 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 GABRA2P47869 451 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 RAB7AP51149 207 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 ZNF83P51522 516 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 DYNLT3P51808 116 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 AKR1C2P52895 323 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 UCNP55089 124 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 SERF2P84101 59 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 DEFA5Q01523 94 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 TLE4Q04727 773 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 RBPJQ06330 500 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 AESQ08117 197 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 BTN1A1Q13410 526 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 AARDQ4LEZ3 155 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 C5orf24Q7Z6I8 188 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 DOLPP1Q86YN1 238 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 FGFRL1Q8N441 504 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 CD177Q8N6Q3 437 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.3□□□□□ -1.56
LINC00871-204ENST00000556886 OR10A7Q8NGE5 316 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 OR5C1Q8NGR4 320 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 OR2G3Q8NGZ4 309 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 OR1L1Q8NH94 360 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 CORO2AQ92828 525 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 PINX1Q96BK5 328 aaKnown RBP5.3□□□□□ -1.56
LINC00871-204ENST00000556886 RBMXL1Q96E39 390 aaKnown RBP5.3□□□□□ -1.56
LINC00871-204ENST00000556886 C14orf79Q96F83 325 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 BSCL2Q96G97 398 aaPredicted RBP5.3□□□□□ -1.56
LINC00871-204ENST00000556886 SGK494Q96LW2 274 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 PSMG3Q9BT73 122 aaPredicted RBP5.3□□□□□ -1.56
LINC00871-204ENST00000556886 MRPL37Q9BZE1 423 aaKnown RBP5.3□□□□□ -1.56
LINC00871-204ENST00000556886 SMIM3Q9BZL3 60 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 LINC00574Q9H8X3 128 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 NGBQ9NPG2 151 aa5.3□□□□□ -1.56
LINC00871-204ENST00000556886 UFSP2Q9NUQ7 469 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms