RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 GIMAP1Q8WWP7 306 aa8.02□□□□□ -1.13
SPTLC2-205ENST00000556607 BORCS5Q969J3 196 aa8.02□□□□□ -1.13
SPTLC2-205ENST00000556607 CITED4Q96RK1 184 aa8.02□□□□□ -1.13
SPTLC2-205ENST00000556607 NEURL2Q9BR09 285 aa8.02□□□□□ -1.13
SPTLC2-205ENST00000556607 ZNF2Q9BSG1 426 aaPredicted RBP8.02□□□□□ -1.13
SPTLC2-205ENST00000556607 BET1LQ9NYM9 111 aa8.02□□□□□ -1.13
SPTLC2-205ENST00000556607 C2orf70A6NJV1 201 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 XRCC3O43542 346 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 TMEM127O75204 238 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 CRYGCP07315 174 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 CD7P09564 240 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 CTRB1P17538 263 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 RPS19P39019 145 aaKnown RBP8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 RFX2P48378 723 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 MSMO1Q15800 293 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 UBE2NLQ5JXB2 153 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 CTRB2Q6GPI1 263 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 OR5H2Q8NGV7 314 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 CXorf58Q96LI9 332 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 FANCD2OSQ96PS1 177 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 HINT2Q9BX68 163 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 THYN1Q9P016 225 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 CEPT1Q9Y6K0 416 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 KMT2CQ8NEZ4 4911 aaKnown RBP8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 TNCP24821 2201 aa8.01□□□□□ -1.13
SPTLC2-205ENST00000556607 A0A087WXM4 84 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 TRBV7-1A0A0A6YYK4 115 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 TRAV3A0A0B4J244 114 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 A0A1B0GW64 132 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 OR11H12B2RN74 326 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 UPK2O00526 184 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 CYB5BO43169 146 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 RBFOX2O43251 390 aaKnown RBP eCLIP8□□□□□ -1.13
SPTLC2-205ENST00000556607 S1PR2O95136 353 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 RLN1P04808 185 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 CLEC3BP05452 202 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 CBLN1P23435 193 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 PRSS3P35030 304 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 TAS2R20P59543 309 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 TSPAN5P62079 268 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 DEFB114Q30KQ6 69 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 GPHB5Q86YW7 130 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 DEFB125Q8N687 156 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 CD300LFQ8TDQ1 290 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 CACNG8Q8WXS5 425 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 WDR89Q96FK6 387 aaPredicted RBP8□□□□□ -1.13
SPTLC2-205ENST00000556607 CCDC140Q96MF4 163 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 SRD5A3Q9H8P0 318 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 TMEM140Q9NV12 185 aa8□□□□□ -1.13
SPTLC2-205ENST00000556607 TECRQ9NZ01 308 aaKnown RBP8□□□□□ -1.13
SPTLC2-205ENST00000556607 IGHV3-35A0A0C4DH35 117 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 SMIM31A0A1B0GVY4 71 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 MFSD2BA6NFX1 497 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 ZNF785A8K8V0 405 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 LGALS9O00182 355 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 TNFAIP8O95379 198 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 HLA-DMAP28067 261 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 GNRHRP30968 328 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 GPR183P32249 361 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 MECP2P51608 486 aaKnown RBP7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 TAS2R46P59540 309 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 OR2B8PP59922 312 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 ZNF57Q68EA5 555 aaPredicted RBP7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 SLC25A24Q6NUK1 477 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 PLET1Q6UQ28 207 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 ADAMTSL5Q6ZMM2 481 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 SLC16A13Q7RTY0 426 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 LAX1Q8IWV1 398 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 CMTM1Q8IZ96 169 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 OR10W1Q8NGF6 305 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 OR6F1Q8NGZ6 308 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 FAM110AQ9BQ89 295 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 THAP7Q9BT49 309 aaPredicted RBP7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 WFDC10AQ9H1F0 79 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 PLEKHA2Q9HB19 425 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 RETNQ9HD89 108 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 COMMD3Q9UBI1 195 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 DMRT1Q9Y5R6 373 aa7.99□□□□□ -1.13
SPTLC2-205ENST00000556607 IGLV11-55A0A075B6I3 123 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 CGB1A6NKQ9 187 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 MARCH11A6NNE9 402 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 PGLYRP1O75594 196 aaPredicted RBP7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 SNAPC5O75971 98 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 SCAF4O95104 1147 aaKnown RBP7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 KRASP01116 189 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 TRAPPC2P0DI81 140 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 TRAPPC2BP0DI82 140 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 F2RP25116 425 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 S100GP29377 79 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 G6PCP35575 357 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 LPAR6P43657 344 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 ZNF585BQ52M93 769 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 DHRS11Q6UWP2 260 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 BTNL8Q6UX41 500 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 RBPMS2Q6ZRY4 209 aaKnown RBP7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 UXS1Q8NBZ7 420 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 OR52B4Q8NGK2 314 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 MOB3AQ96BX8 217 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 YIPF6Q96EC8 236 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 QTRT1Q9BXR0 403 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms