RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 IGHG1P01857 330 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 SMIM13P0DJ93 91 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 VDAC1P21796 283 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 ACRV1P26436 265 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 APOBEC1P41238 236 aaKnown RBP5.11□□□□□ -1.59
TDP1-215ENST00000556498 HERVK_113P63121 156 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 ATXN7L3Q14CW9 347 aaPredicted RBP5.11□□□□□ -1.59
TDP1-215ENST00000556498 CD226Q15762 336 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 IGFBP7Q16270 282 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 RRN3P1Q2M238 152 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 C12orf73Q69YU5 71 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 Q6ZRM9 215 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 BPIFA4PQ86YQ2 179 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 TMEM256Q8N2U0 113 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 C3orf22Q8N5N4 141 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 WDR31Q8NA23 367 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 APCDD1LQ8NCL9 501 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 NUP35Q8NFH5 326 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 SGMS2Q8NHU3 365 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 PPDPFLQ8WWR9 84 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 NEURL3Q96EH8 262 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 PDCD1LG2Q9BQ51 273 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 RNF126Q9BV68 326 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 TM2D1Q9BX74 207 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 C5orf66Q9H5L9 145 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 ZNF442Q9H7R0 627 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 PLEKHF2Q9H8W4 249 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 EDA2RQ9HAV5 297 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 CISD1Q9NZ45 108 aaKnown RBP5.11□□□□□ -1.59
TDP1-215ENST00000556498 PKIGQ9Y2B9 76 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 NUP210LQ5VU65 1888 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 M0R2P5 195 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 NDUFB4O95168 129 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 IGHMP01871 453 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 GRPP07492 148 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 SP9P0CG40 484 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 CD58P19256 250 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 CTGFP29279 349 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 HMGA2P52926 109 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 HILS1P60008 231 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 RND3P61587 244 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 CX3CL1P78423 397 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 DIAPH2-AS1Q14236 149 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 IBA57Q5T440 356 aaKnown RBP5.1□□□□□ -1.59
TDP1-215ENST00000556498 C9orf153Q5TBE3 101 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 LYRM7Q5U5X0 104 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 RPL7L1Q6DKI1 246 aaKnown RBP5.1□□□□□ -1.59
TDP1-215ENST00000556498 OR4C11Q6IEV9 310 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 HRCT1Q6UXD1 115 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 CYP2G1PQ6ZSU1 146 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 SLC25A48Q6ZT89 311 aaKnown RBP5.1□□□□□ -1.59
TDP1-215ENST00000556498 NR2C2APQ86WQ0 139 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 GAPTQ8N292 157 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 OTOSQ8NHW6 89 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 OSR1Q8TAX0 266 aaPredicted RBP5.1□□□□□ -1.59
TDP1-215ENST00000556498 ADOQ96SZ5 270 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 IMUPQ9GZP8 106 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 RHOJQ9H4E5 214 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 PLAC1Q9HBJ0 212 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 TECRQ9NZ01 308 aaKnown RBP5.1□□□□□ -1.59
TDP1-215ENST00000556498 ZNF581Q9P0T4 197 aa5.1□□□□□ -1.59
TDP1-215ENST00000556498 KLF13Q9Y2Y9 288 aaPredicted RBP5.1□□□□□ -1.59
TDP1-215ENST00000556498 CHCHD2Q9Y6H1 151 aaPredicted RBP5.1□□□□□ -1.59
TDP1-215ENST00000556498 DOCK5Q9H7D0 1870 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 UBR2Q8IWV8 1755 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 QSER1Q2KHR3 1735 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 C3orf85A0A1B0GTC6 90 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 LILRA5A6NI73 299 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 TMEM150CB9EJG8 249 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 K7ESM1 405 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 RRHO14718 337 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 LDB3O75112 727 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 ZFAND5O76080 213 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 CLDN14O95500 239 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 ZNF688P0C7X2 276 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 BCL2P10415 239 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 IGLL1P15814 213 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 FKBP1BP68106 108 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 PLGLB1Q02325 96 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 SLC38A11Q08AI6 406 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 FUT5Q11128 374 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 PMAIP1Q13794 54 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 Q499Y3 187 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 TMEM136Q6ZRR5 245 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 TRPT1Q86TN4 253 aaKnown RBP5.09□□□□□ -1.59
TDP1-215ENST00000556498 RFLNBQ8N5W9 214 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 NFAM1Q8NET5 270 aaPredicted RBP5.09□□□□□ -1.59
TDP1-215ENST00000556498 GATAD1Q8WUU5 269 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 APOBEC4Q8WW27 367 aaKnown RBP5.09□□□□□ -1.59
TDP1-215ENST00000556498 FGF14Q92915 247 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 LSM10Q969L4 123 aaKnown RBP5.09□□□□□ -1.59
TDP1-215ENST00000556498 MRPL53Q96EL3 112 aaKnown RBP5.09□□□□□ -1.59
TDP1-215ENST00000556498 KCNS1Q96KK3 526 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 PRELID3AQ96N28 172 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 MCEEQ96PE7 176 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 VKORC1Q9BQB6 163 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 BCL2L10Q9HD36 194 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 CMC2Q9NRP2 79 aa5.09□□□□□ -1.59
TDP1-215ENST00000556498 TAAR3PQ9P1P4 343 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms