RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 CREBL2O60519 120 aaPredicted RBP7.53□□□□□ -1.2
SCFD1-220ENST00000556486 CD3GP09693 182 aa7.53□□□□□ -1.2
SCFD1-220ENST00000556486 DUTP33316 252 aaKnown RBP7.53□□□□□ -1.2
SCFD1-220ENST00000556486 CD81P60033 236 aa7.53□□□□□ -1.2
SCFD1-220ENST00000556486 RPS25P62851 125 aaKnown RBP7.53□□□□□ -1.2
SCFD1-220ENST00000556486 EWSR1Q01844 656 aaKnown RBP eCLIP7.53□□□□□ -1.2
SCFD1-220ENST00000556486 CBX3Q13185 183 aa7.53□□□□□ -1.2
SCFD1-220ENST00000556486 SSX1Q16384 188 aa7.53□□□□□ -1.2
SCFD1-220ENST00000556486 RPEL1Q2QD12 228 aa7.53□□□□□ -1.2
SCFD1-220ENST00000556486 DEFB125Q8N687 156 aa7.53□□□□□ -1.2
SCFD1-220ENST00000556486 SYT8Q8NBV8 401 aa7.53□□□□□ -1.2
SCFD1-220ENST00000556486 SRSF12Q8WXF0 261 aaKnown RBP7.53□□□□□ -1.2
SCFD1-220ENST00000556486 SPIN2AQ99865 258 aa7.53□□□□□ -1.2
SCFD1-220ENST00000556486 SPIN2BQ9BPZ2 258 aa7.53□□□□□ -1.2
SCFD1-220ENST00000556486 ZC4H2Q9NQZ6 224 aa7.53□□□□□ -1.2
SCFD1-220ENST00000556486 COA4Q9NYJ1 87 aa7.53□□□□□ -1.2
SCFD1-220ENST00000556486 TPRKBQ9Y3C4 175 aa7.53□□□□□ -1.2
SCFD1-220ENST00000556486 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.52□□□□□ -1.21
SCFD1-220ENST00000556486 A0A0B4J203 849 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 TRAV1-2A0A0B4J238 106 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 TMEM272A0A1B0GTI8 110 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 MSGN1A6NI15 193 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 BMPR1BO00238 502 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 BET1O15155 118 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 GSTT2P0CG29 244 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 GSTT2BP0CG30 244 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 HIST1H1DP16402 221 aaKnown RBP7.52□□□□□ -1.21
SCFD1-220ENST00000556486 CALRP27797 417 aaKnown RBP7.52□□□□□ -1.21
SCFD1-220ENST00000556486 CLDN12P56749 244 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 MRPS15P82914 257 aaKnown RBP7.52□□□□□ -1.21
SCFD1-220ENST00000556486 FABP5Q01469 135 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 KLK9Q2XQG4 91 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 VMA21Q3ZAQ7 101 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 H1FOOQ8IZA3 346 aaPredicted RBP7.52□□□□□ -1.21
SCFD1-220ENST00000556486 TTC9CQ8N5M4 171 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 NECAP1Q8NC96 275 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 OR10R2Q8NGX6 335 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 FBXL17Q9UF56 701 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 KLK9Q9UKQ9 250 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 DMRT1Q9Y5R6 373 aa7.52□□□□□ -1.21
SCFD1-220ENST00000556486 IFITM5A6NNB3 132 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 LINC00473A8K010 186 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 LGALS9O00182 355 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 CRYZL1O95825 349 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 DTYMKP23919 212 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 GADD45AP24522 165 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 RHOGP84095 191 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 ZNF45Q02386 682 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 PLA2G7Q13093 441 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 ARL6IP1Q15041 203 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 CDK10Q15131 360 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 SERTAD4-AS1Q5TG53 156 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 PRSS48Q7RTY5 328 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 MMD2Q8IY49 270 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 MGLLQ99685 303 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 ZNF430Q9H8G1 570 aaPredicted RBP7.51□□□□□ -1.21
SCFD1-220ENST00000556486 SRD5A3Q9H8P0 318 aa7.51□□□□□ -1.21
SCFD1-220ENST00000556486 KRTAP4-8A0A0G2JLE6 195 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 SLC22A5O76082 557 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 TPPPO94811 219 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 CD7P09564 240 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 NPSP0C0P6 89 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 HSMCR30P0CW71 290 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 SAA1P0DJI8 122 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-220ENST00000556486 GNB3P16520 340 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 GALP22466 123 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 CRHBPP24387 322 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 MFAP4P55083 255 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 ATP5G2Q06055 141 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 EXOSC2Q13868 293 aaKnown RBP7.5□□□□□ -1.21
SCFD1-220ENST00000556486 TNXAQ16473 311 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 DEFB114Q30KQ6 69 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 RNASE12Q5GAN4 147 aaKnown RBP7.5□□□□□ -1.21
SCFD1-220ENST00000556486 SLC25A42Q86VD7 318 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 ZNF645Q8N7E2 425 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 PHB2Q99623 299 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 NEURL2Q9BR09 285 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 SRSF8Q9BRL6 282 aaKnown RBP7.5□□□□□ -1.21
SCFD1-220ENST00000556486 GINS4Q9BRT9 223 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 SLC2A8Q9NY64 477 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 TECRQ9NZ01 308 aaKnown RBP7.5□□□□□ -1.21
SCFD1-220ENST00000556486 ZNF257Q9Y2Q1 563 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 VPS13DQ5THJ4 4388 aa7.5□□□□□ -1.21
SCFD1-220ENST00000556486 IGKV1D-8A0A087WSZ0 117 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 METTL21EPA6NDL7 271 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 C2orf70A6NJV1 201 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 A8MWP6 167 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 PDCD5O14737 125 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 IGLV2-14P01704 120 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 HLA-DQB1P01920 261 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 CTXN2P0C2S0 81 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 APELAP0DMC3 54 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 KIR2DS2P43631 304 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 C15orf32Q32M92 178 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 HES5Q5TA89 166 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 IDO2Q6ZQW0 420 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 GPHB5Q86YW7 130 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 ACOT12Q8WYK0 555 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 DCSTAMPQ9H295 470 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 NDUFB11Q9NX14 153 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms