RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 LOXL3P58215 753 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 JOSD1Q15040 202 aaPredicted RBP5.78□□□□□ -1.48
TDP1-213ENST00000555880 MIC13Q5XKP0 118 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 TEPPQ6URK8 271 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 ZADH2Q8N4Q0 377 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 Q8N7P7 452 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 LINC00469Q8N7U9 141 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 ZNRF1Q8ND25 227 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 SLC24A4Q8NFF2 622 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 SFRP2Q96HF1 295 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 MEGF10Q96KG7 1140 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 RHOVQ96L33 236 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 UHRF2Q96PU4 802 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 TP53TG5Q9Y2B4 290 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 TANC2Q9HCD6 1990 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 TET2Q6N021 2002 aaPredicted RBP5.78□□□□□ -1.48
TDP1-213ENST00000555880 A0A0U1RQK1 487 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 KBTBD11-OT1A0A1B0GTJ5 212 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 ZNF320A2RRD8 509 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 MBD3L4A6NDZ8 208 aaPredicted RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 MBD3L3A6NE82 208 aaPredicted RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 MBD3L5A6NJ08 208 aaPredicted RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 SPRY3O43610 288 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 PROP1O75360 226 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 CGAP01215 116 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 STAG3L2P0CL84 134 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 STAG3L3P0CL85 134 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 TNFSF4P23510 183 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 NPPCP23582 126 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 IL3RAP26951 378 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 GLRXP35754 106 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 PLA2G5P39877 138 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 CNN1P51911 297 aaKnown RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 HSPE1P61604 102 aaKnown RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 FOXL1Q12952 345 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 DEFB109BQ30KR1 87 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 TMEM30BQ3MIR4 351 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 C3orf36Q3SXR2 165 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 TIMM23BQ5SRD1 257 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 OR4A47Q6IF82 309 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 VHLLQ6RSH7 139 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 IGF2-ASQ6U949 168 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 LRP11Q86VZ4 500 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 ABHD12Q8N2K0 398 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 MBD3L2Q8NHZ7 208 aaPredicted RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 Q8TCH9 128 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 SSMEM1Q8WWF3 244 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 DERL1Q9BUN8 251 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 ASCL3Q9NQ33 180 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 FOXA2Q9Y261 457 aaPredicted RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 TRAPPC1Q9Y5R8 145 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 DSPP15924 2871 aaKnown RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 CELSR3Q9NYQ7 3312 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 A0A087X0M5 115 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 SAA2-SAA4A0A096LPE2 208 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 TRAV3A0A0B4J244 114 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 A0A1B0GX30 115 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 A8MXE2 369 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 PRSS46E5RG02 174 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 IL6RP08887 468 aaPredicted RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 SAA2P0DJI9 122 aaPredicted RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 GZMBP10144 247 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 ZNF134P52741 427 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 MRPS11P82912 194 aaKnown RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 RTL8BQ17RB0 113 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 C8orf86Q6ZUL3 223 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 REC114Q7Z4M0 266 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 MRPL41Q8IXM3 137 aaKnown RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 LYG1Q8N1E2 194 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 STPG3Q8N7X2 389 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 SGMS2Q8NHU3 365 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 ITLN1Q8WWA0 313 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 DDB2Q92466 427 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 NOL4LQ96MY1 436 aaPredicted RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 LRFN3Q9BTN0 628 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 SFXN3Q9BWM7 321 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 HINT2Q9BX68 163 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 PRO1933Q9H354 126 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 TMEM14BQ9NUH8 114 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 RNF7Q9UBF6 113 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 DKK4Q9UBT3 224 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 PRNDQ9UKY0 176 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 LSM4Q9Y4Z0 139 aaKnown RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 DSCAML1Q8TD84 2053 aa5.77□□□□□ -1.49
TDP1-213ENST00000555880 RP1L1Q8IWN7 2480 aaPredicted RBP5.77□□□□□ -1.49
TDP1-213ENST00000555880 CACNA1HO95180 2353 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 TRAV9-1A0A075B6T8 112 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 ZNF705GA8MUZ8 300 aaPredicted RBP5.76□□□□□ -1.49
TDP1-213ENST00000555880 FNDC10F2Z333 226 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 FAM229AH3BQW9 127 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 SLC31A2O15432 143 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 LHBP01229 141 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 C1QTNF9P0C862 333 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 IRF2P14316 349 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 GCHFRP30047 84 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 GATA4P43694 442 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 RPL29P47914 159 aaKnown RBP5.76□□□□□ -1.49
TDP1-213ENST00000555880 RPL19P84098 196 aaKnown RBP5.76□□□□□ -1.49
TDP1-213ENST00000555880 TNFAIP6P98066 277 aaPredicted RBP5.76□□□□□ -1.49
TDP1-213ENST00000555880 SRSF6Q13247 344 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms