RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 SPIN2AQ99865 258 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 SPIN2BQ9BPZ2 258 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 DCUN1D5Q9BTE7 237 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 ELOVL1Q9BW60 279 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 FUNDC2Q9BWH2 189 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 FXYD6Q9H0Q3 95 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 BET1LQ9NYM9 111 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 SIGLEC8Q9NYZ4 499 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 S4R3C0 116 aa7.05□□□□□ -1.28
VIPAS39-207ENST00000555854 DNAH6Q9C0G6 4158 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 KMT2AQ03164 3969 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 SULT1C2O00338 296 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 RBFOX2O43251 390 aaKnown RBP eCLIP7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 XRCC3O43542 346 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 AIREO43918 545 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 CREBL2O60519 120 aaPredicted RBP7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 S1PR2O95136 353 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 NDUFB8O95169 186 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 IGHV3-23P01764 117 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 REG1AP05451 166 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 EIF4EP06730 217 aaKnown RBP7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 CTRB1P17538 263 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 FXYD4P59646 89 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 OR2B8PP59922 312 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 NCS1P62166 190 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 POU2AF1Q16633 256 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 RPEL1Q2QD12 228 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 CTRB2Q6GPI1 263 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 TMEM17Q86X19 198 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 SPAG16Q8N0X2 631 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 NECAP1Q8NC96 275 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 OR5AP2Q8NGF4 316 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 FYTTD1Q96QD9 318 aaKnown RBP7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 SLC5A7Q9GZV3 580 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 SLC2A9Q9NRM0 540 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 ZNF257Q9Y2Q1 563 aa7.04□□□□□ -1.28
VIPAS39-207ENST00000555854 IGLV11-55A0A075B6I3 123 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 IGLC7A0M8Q6 106 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 MFSD2BA6NFX1 497 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 ACTL6BO94805 426 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 HLA-GP17693 338 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 NAT1P18440 290 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 PSMB6P28072 239 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 GNRHRP30968 328 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 KIR2DS2P43631 304 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 RPL8P62917 257 aaKnown RBP7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 ATP5G2Q06055 141 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 CTF1Q16619 201 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 UBE2NLQ5JXB2 153 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 Q6ZNX1 250 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 SAMD12Q8N8I0 201 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 OR51H1Q8NH63 302 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 VSTM2AQ8TAG5 236 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 GIMAP1Q8WWP7 306 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 CACNG8Q8WXS5 425 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 WFDC10AQ9H1F0 79 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 EDA2RQ9HAV5 297 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 SELENOKQ9Y6D0 94 aa7.03□□□□□ -1.28
VIPAS39-207ENST00000555854 TMEM213A2RRL7 107 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 C2orf70A6NJV1 201 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 ZNF785A8K8V0 405 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 UPK2O00526 184 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 PFDN1O60925 122 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 TMEM127O75204 238 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 RPA2P15927 270 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 MAS1LP35410 378 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 CBX5P45973 191 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 RFX2P48378 723 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 TAS2R31P59538 309 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 CD300EQ496F6 205 aaPredicted RBP7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 TMEM69Q5SWH9 247 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 LINC00322Q6ZN03 302 aaPredicted RBP7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 Q8N402 240 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 ZBTB34Q8NCN2 500 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 MUC7Q8TAX7 377 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 SLC25A46Q96AG3 418 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 MOB3AQ96BX8 217 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 ZNF414Q96IQ9 312 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 RETNQ9HD89 108 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 ZC4H2Q9NQZ6 224 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 DIABLOQ9NR28 239 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 TMEM140Q9NV12 185 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 EHFQ9NZC4 300 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 FBXL7Q9UJT9 491 aa7.02□□□□□ -1.29
VIPAS39-207ENST00000555854 A8MWP6 167 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 H0Y980 276 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 C3orf84H3BNL1 204 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 OR2C1O95371 312 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 HPRT1P00492 218 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 HRASP01112 189 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 PMP2P02689 132 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 RLN1P04808 185 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 CD7P09564 240 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 NQO2P16083 231 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 ZNF182P17025 639 aaPredicted RBP7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 MFAP2P55001 183 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 WT1-ASQ06250 92 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 HAGHQ16775 308 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 ZNF585BQ52M93 769 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 CASC10Q5T4H9 136 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms