RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 TAS2R30P59541 319 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 RPL23AP62750 156 aaKnown RBP7.98□□□□□ -1.13
PSEN1-213ENST00000555386 SSX2Q16385 188 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 FAM74A3Q4VXF1 159 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 MIDNQ504T8 468 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 CXorf66Q5JRM2 361 aaPredicted RBP7.98□□□□□ -1.13
PSEN1-213ENST00000555386 FAM122CQ6P4D5 195 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 TRAT1Q6PIZ9 186 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 STX12Q86Y82 276 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 TCTEX1D1Q8N7M0 179 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 OR52L2PQ8NGH6 319 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 OR8U1Q8NH10 309 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 GPR146Q96CH1 333 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 NCOR1P1Q9H4R4 102 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 COA4Q9NYJ1 87 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 OR1A1Q9P1Q5 309 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 WSB1Q9Y6I7 421 aa7.98□□□□□ -1.13
PSEN1-213ENST00000555386 NUPL2O15504 423 aaKnown RBP7.97□□□□□ -1.13
PSEN1-213ENST00000555386 HOXA3O43365 443 aaPredicted RBP7.97□□□□□ -1.13
PSEN1-213ENST00000555386 TNFSF12O43508 249 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 CHST1O43916 411 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 FBP1P09467 338 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 PPP1CCP36873 323 aaKnown RBP7.97□□□□□ -1.13
PSEN1-213ENST00000555386 SULT1A1P50225 295 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 ARHGDIBP52566 201 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 ZNF616Q08AN1 781 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 GUK1Q16774 197 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 HSD17B11Q8NBQ5 300 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 OR5C1Q8NGR4 320 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 OR51H1Q8NH63 302 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 GALMQ96C23 342 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 ATP5SQ99766 215 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 TMEM231Q9H6L2 316 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 ESM1Q9NQ30 184 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 PSG11Q9UQ72 335 aa7.97□□□□□ -1.13
PSEN1-213ENST00000555386 RBM7Q9Y580 266 aaKnown RBP7.97□□□□□ -1.13
PSEN1-213ENST00000555386 DNAJC9-AS1A6NH13 148 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 SLC31A2O15432 143 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 TXNL1O43396 289 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 CTRB1P17538 263 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 ATP6V0CP27449 155 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 HTR1DP28221 377 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 CEACAM6P40199 344 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 RAB13P51153 203 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 DYNLT3P51808 116 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 PRRX1P54821 245 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 PAX9P55771 341 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 RIPPLY3P57055 190 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 BPIFB3P59826 476 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 FLI1Q01543 452 aaPredicted RBP7.96□□□□□ -1.13
PSEN1-213ENST00000555386 LY6EQ16553 131 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 LDLRAD2Q5SZI1 272 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 CTRB2Q6GPI1 263 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 C9orf139Q6ZV77 190 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 DYNAPQ8N1N2 210 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 ZNF645Q8N7E2 425 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 OR11H6Q8NGC7 330 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 OR10X1Q8NGY0 326 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 OR2G3Q8NGZ4 309 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 RNASE11Q8TAA1 199 aaKnown RBP7.96□□□□□ -1.13
PSEN1-213ENST00000555386 SCRT1Q9BWW7 348 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 MAGT1Q9H0U3 335 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 SH3BGRL3Q9H299 93 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 GFOD1Q9NXC2 390 aa7.96□□□□□ -1.13
PSEN1-213ENST00000555386 ODF3BA8MYP8 253 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 H7C2Y5 167 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 J3QR06 171 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 F2RL2O00254 374 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 AGPAT2O15120 278 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 SYNGR2O43760 224 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 TMEM50AO95807 157 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 IGKV1-39P01597 117 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 IGHV4-59P01825 116 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 IGKV1D-39P04432 117 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 OR8U8P0C7N1 319 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 NPBWR1P48145 328 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 REG1BP48304 166 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 LOXL3P58215 753 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 CATR1Q13166 79 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 CLINT1Q14677 625 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 ZNF585BQ52M93 769 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 SMUG1Q53HV7 270 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 TMEM182Q6ZP80 229 aaPredicted RBP7.95□□□□□ -1.14
PSEN1-213ENST00000555386 ODF3L1Q8IXM7 274 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 DRAM1Q8N682 238 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 OR4P4Q8NGL7 312 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 OR9G1Q8NH87 305 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 ZNF596Q8TC21 504 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 TAF15Q92804 592 aaKnown RBP eCLIP7.95□□□□□ -1.14
PSEN1-213ENST00000555386 AJUBAQ96IF1 538 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 GPHA2Q96T91 129 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 SSX3Q99909 188 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 AIFM2Q9BRQ8 373 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 PARD6GQ9BYG4 376 aaPredicted RBP7.95□□□□□ -1.14
PSEN1-213ENST00000555386 RAB9BQ9NP90 201 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 RNF150Q9ULK6 438 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 MMP24Q9Y5R2 645 aa7.95□□□□□ -1.14
PSEN1-213ENST00000555386 A0A0G2JRQ6 117 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 BUB1B-PAK6H3BSN5 160 aa7.94□□□□□ -1.14
PSEN1-213ENST00000555386 H3BUX3 64 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms