RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TRAV8-2A0A0B4J237 113 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 CXCL10P02778 98 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 CD7P09564 240 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 MMP16P51512 607 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 C9orf40Q8IXQ3 194 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 ARPC1AQ92747 370 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 JPT2Q9H910 190 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 XIRP1Q702N8 1843 aaKnown RBP5.9□□□□□ -1.46
SYNE2-216ENST00000555002 H0Y980 276 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 RIPPLY3P57055 190 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 ZNF385AQ96PM9 386 aaKnown RBP5.9□□□□□ -1.46
SYNE2-216ENST00000555002 LAMTOR3Q9UHA4 124 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 CCDC168Q8NDH2 2452 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 P2RY4P51582 365 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 ISXQ2M1V0 245 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 AICDAQ9GZX7 198 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 GGTLC3B5MD39 225 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 IGKV1D-33P01593 117 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 IGKV1-33P01594 117 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 CEACAM21Q3KPI0 293 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 LINC00305Q7Z4B0 112 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 ATG4DQ86TL0 474 aaPredicted RBP5.9□□□□□ -1.46
SYNE2-216ENST00000555002 PLXND1Q9Y4D7 1925 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 MYO18BQ8IUG5 2567 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 TGIF2-C20orf24A0A0A6YYL0 155 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 OR51M1Q9H341 326 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 C7orf69Q9H7B7 122 aa5.9□□□□□ -1.46
SYNE2-216ENST00000555002 CA1P00915 261 aaPredicted RBP5.9□□□□□ -1.47
SYNE2-216ENST00000555002 SRSF7Q16629 238 aaKnown RBP eCLIP5.9□□□□□ -1.47
SYNE2-216ENST00000555002 CENPWQ5EE01 88 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 DDA1Q9BW61 102 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 SPCS1Q9Y6A9 102 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 IGHV3-73A0A0B4J1V6 119 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 TRAV24A0A0B4J272 114 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 FHITP49789 147 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 SRSF4Q08170 494 aaKnown RBP5.9□□□□□ -1.47
SYNE2-216ENST00000555002 RPL39P5Q59GN2 51 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 OR4D11Q8NGI4 311 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 NRIP2Q9BQI9 281 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 VCX2Q9H322 139 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 PEMTQ9UBM1 199 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 ST6GALNAC2Q9UJ37 374 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 TSC2P49815 1807 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 BGLAPP02818 100 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 ICAM4Q14773 271 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 ZNF818PQ6ZRF7 136 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 TMEM167AQ8TBQ9 72 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 CD28P10747 220 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 CRYBB3P26998 211 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 CDCP2Q5VXM1 449 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 OR9G1Q8NH87 305 aa5.9□□□□□ -1.47
SYNE2-216ENST00000555002 A0A0G2JLM5 398 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 DTX2Q86UW9 622 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 ZNF107Q9UII5 783 aaPredicted RBP5.89□□□□□ -1.47
SYNE2-216ENST00000555002 TRPM7Q96QT4 1865 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 KLK8O60259 260 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 CD33P20138 364 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 MEF2BQ02080 365 aaPredicted RBP5.89□□□□□ -1.47
SYNE2-216ENST00000555002 TMEM249Q2WGJ8 235 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 TCF23Q7RTU1 214 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 VN1R4Q7Z5H5 301 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 RFLNBQ8N5W9 214 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 RARRES2Q99969 163 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 CXorf65A6NEN9 183 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 CBLN1P23435 193 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 MZB1Q8WU39 189 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 JMJD8Q96S16 334 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 NPVFQ9HCQ7 196 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 EML6Q6ZMW3 1958 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 NAT1P18440 290 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 PMCHL2Q9BQD1 86 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 FAM206AQ9NX38 181 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 TRAV2A0A0B4J234 112 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 ATP5LO75964 103 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 WDR34Q96EX3 536 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 KCNE1BA0A087WTH5 132 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 A0A1W2PP11 408 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 CGB3P0DN86 165 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 IL11P20809 199 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 GATD1Q8NB37 220 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 OR13A1Q8NGR1 328 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 WDR54Q9H977 334 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 CA11O75493 328 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 TRGC2P03986 189 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 SEPSECSQ9HD40 501 aaKnown RBP5.89□□□□□ -1.47
SYNE2-216ENST00000555002 STRCQ7RTU9 1775 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 SIGLEC5O15389 551 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 SPINT1O43278 529 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 LHBP01229 141 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 IL6RP08887 468 aaPredicted RBP5.89□□□□□ -1.47
SYNE2-216ENST00000555002 DUSP15Q9H1R2 295 aaPredicted RBP5.89□□□□□ -1.47
SYNE2-216ENST00000555002 H1FOOQ8IZA3 346 aaPredicted RBP5.89□□□□□ -1.47
SYNE2-216ENST00000555002 CBLN4Q9NTU7 201 aa5.89□□□□□ -1.47
SYNE2-216ENST00000555002 ZP4Q12836 540 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 FAM214BQ7L5A3 538 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 RNF182Q8N6D2 247 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 SFXN3Q9BWM7 321 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 FOXJ2Q9P0K8 574 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 TMEM50AO95807 157 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 MT-ND6P03923 174 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms