RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 LAMB4A4D0S4 1761 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 CACNA1BQ00975 2339 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 TRAPPC2LH3BP13 241 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 LEPROTO15243 131 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 SLC22A1O15245 554 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 METTL15P1P0C7V9 234 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 NFYAP23511 347 aaPredicted RBP0.63□□□□□ -2.31
SCFD1-214ENST00000554819 CDC34P49427 236 aaPredicted RBP0.63□□□□□ -2.31
SCFD1-214ENST00000554819 RAB13P51153 203 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 MED12LQ86YW9 2145 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 FAM19A2Q8N3H0 131 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 ZNF565Q8N9K5 539 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 EEF1AKMT1Q8WVE0 214 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 SMIM19Q96E16 107 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 BBS2Q9BXC9 721 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 YIPF3Q9GZM5 350 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 NDEL1Q9GZM8 345 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 TRABDQ9H4I3 376 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 FKBP14Q9NWM8 211 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 ANAPC10Q9UM13 185 aa0.63□□□□□ -2.31
SCFD1-214ENST00000554819 IGHV1-69-2A0A0G2JMI3 117 aa0.62□□□□□ -2.31
SCFD1-214ENST00000554819 ITGB1BP1O14713 200 aa0.62□□□□□ -2.31
SCFD1-214ENST00000554819 UBBP0CG47 229 aa0.62□□□□□ -2.31
SCFD1-214ENST00000554819 SULT1A3P0DMM9 295 aa0.62□□□□□ -2.31
SCFD1-214ENST00000554819 SULT1A4P0DMN0 295 aa0.62□□□□□ -2.31
SCFD1-214ENST00000554819 FXYD2P54710 66 aa0.62□□□□□ -2.31
SCFD1-214ENST00000554819 TEX36Q5VZQ5 186 aa0.62□□□□□ -2.31
SCFD1-214ENST00000554819 TNFAIP8L2Q6P589 184 aaPredicted RBP0.62□□□□□ -2.31
SCFD1-214ENST00000554819 SGMS2Q8NHU3 365 aa0.62□□□□□ -2.31
SCFD1-214ENST00000554819 ANKRD7Q92527 254 aa0.62□□□□□ -2.31
SCFD1-214ENST00000554819 WDR54Q9H977 334 aa0.62□□□□□ -2.31
SCFD1-214ENST00000554819 CXorf21Q9HAI6 301 aa0.62□□□□□ -2.31
SCFD1-214ENST00000554819 OR5AC2Q9NZP5 309 aa0.62□□□□□ -2.31
SCFD1-214ENST00000554819 SYNRGQ9UMZ2 1314 aa0.62□□□□□ -2.31
SCFD1-214ENST00000554819 KIF24Q5T7B8 1368 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 KIF15Q9NS87 1388 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 UNC79Q9P2D8 2635 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 C21orf140B9A014 251 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 DISC1C4P0D8 188 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 BIRC5O15392 142 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 NDUFS6O75380 124 aaKnown RBP0.61□□□□□ -2.31
SCFD1-214ENST00000554819 PMP2P02689 132 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 OCMP0CE72 109 aaPredicted RBP0.61□□□□□ -2.31
SCFD1-214ENST00000554819 S100A7P31151 101 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 MGAT3Q09327 533 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 TNFAIP8L3Q5GJ75 292 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 SLC51BQ86UW2 128 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 ZNF439Q8NDP4 499 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 OR1M1Q8NGA1 313 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 BAIAP2Q9UQB8 552 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 POLR1DQ9Y2S0 133 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 COQ4Q9Y3A0 265 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 RAD50Q92878 1312 aa0.61□□□□□ -2.31
SCFD1-214ENST00000554819 STRCQ7RTU9 1775 aa0.6□□□□□ -2.31
SCFD1-214ENST00000554819 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.6□□□□□ -2.31
SCFD1-214ENST00000554819 TRAV14DV4A0A0A6YYC5 116 aa0.6□□□□□ -2.31
SCFD1-214ENST00000554819 GOLGA8MH3BSY2 632 aa0.6□□□□□ -2.31
SCFD1-214ENST00000554819 C1QAP02745 245 aa0.6□□□□□ -2.31
SCFD1-214ENST00000554819 IL3P08700 152 aa0.6□□□□□ -2.31
SCFD1-214ENST00000554819 RNASE3P12724 160 aaKnown RBP0.6□□□□□ -2.31
SCFD1-214ENST00000554819 UGT2B7P16662 529 aa0.6□□□□□ -2.31
SCFD1-214ENST00000554819 ZNF345Q14585 488 aa0.6□□□□□ -2.31
SCFD1-214ENST00000554819 CLEC6AQ6EIG7 209 aa0.6□□□□□ -2.31
SCFD1-214ENST00000554819 HIST2H3AQ71DI3 136 aa0.6□□□□□ -2.31
SCFD1-214ENST00000554819 Q8N402 240 aa0.6□□□□□ -2.31
SCFD1-214ENST00000554819 OR4C6Q8NH72 309 aa0.6□□□□□ -2.31
SCFD1-214ENST00000554819 KCTD7Q96MP8 289 aa0.6□□□□□ -2.31
SCFD1-214ENST00000554819 ERMAPQ96PL5 475 aaPredicted RBP0.6□□□□□ -2.31
SCFD1-214ENST00000554819 OR8D2Q9GZM6 311 aa0.6□□□□□ -2.31
SCFD1-214ENST00000554819 IRGMA1A4Y4 181 aa0.59□□□□□ -2.31
SCFD1-214ENST00000554819 FUOMA2VDF0 154 aa0.59□□□□□ -2.31
SCFD1-214ENST00000554819 TMEM212A6NML5 194 aa0.59□□□□□ -2.31
SCFD1-214ENST00000554819 OR4C45A6NMZ5 311 aa0.59□□□□□ -2.31
SCFD1-214ENST00000554819 I3L521 148 aa0.59□□□□□ -2.31
SCFD1-214ENST00000554819 LST1O00453 97 aa0.59□□□□□ -2.31
SCFD1-214ENST00000554819 NOS1APO75052 506 aaPredicted RBP0.59□□□□□ -2.31
SCFD1-214ENST00000554819 IGHV3-7P01780 117 aa0.59□□□□□ -2.31
SCFD1-214ENST00000554819 HLA-DRAP01903 254 aa0.59□□□□□ -2.31
SCFD1-214ENST00000554819 HLA-DMBP28068 263 aa0.59□□□□□ -2.31
SCFD1-214ENST00000554819 OR4D2P58180 307 aa0.59□□□□□ -2.31
SCFD1-214ENST00000554819 FUNDC1Q8IVP5 155 aa0.59□□□□□ -2.31
SCFD1-214ENST00000554819 TMEM251Q8N6I4 163 aa0.59□□□□□ -2.31
SCFD1-214ENST00000554819 ROPN1LQ96C74 230 aa0.59□□□□□ -2.31
SCFD1-214ENST00000554819 OR51I2Q9H344 312 aa0.59□□□□□ -2.31
SCFD1-214ENST00000554819 A0A087WX48 190 aa0.58□□□□□ -2.32
SCFD1-214ENST00000554819 SHBGP04278 402 aa0.58□□□□□ -2.32
SCFD1-214ENST00000554819 FGF6P10767 208 aa0.58□□□□□ -2.32
SCFD1-214ENST00000554819 PSMB6P28072 239 aa0.58□□□□□ -2.32
SCFD1-214ENST00000554819 FABP9Q0Z7S8 132 aa0.58□□□□□ -2.32
SCFD1-214ENST00000554819 BATFQ16520 125 aa0.58□□□□□ -2.32
SCFD1-214ENST00000554819 C1orf194Q5T5A4 169 aa0.58□□□□□ -2.32
SCFD1-214ENST00000554819 AQP3Q92482 292 aa0.58□□□□□ -2.32
SCFD1-214ENST00000554819 DKKL1Q9UK85 242 aa0.58□□□□□ -2.32
SCFD1-214ENST00000554819 FUT9Q9Y231 359 aa0.58□□□□□ -2.32
SCFD1-214ENST00000554819 PXMP4Q9Y6I8 212 aa0.58□□□□□ -2.32
SCFD1-214ENST00000554819 GGT3PA6NGU5 568 aa0.57□□□□□ -2.32
SCFD1-214ENST00000554819 SSNA1O43805 119 aa0.57□□□□□ -2.32
SCFD1-214ENST00000554819 SRP19P09132 144 aaKnown RBP0.57□□□□□ -2.32
SCFD1-214ENST00000554819 TNFAIP6P98066 277 aaPredicted RBP0.57□□□□□ -2.32
SCFD1-214ENST00000554819 RUNX1Q01196 453 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms