RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 CX3CL1P78423 397 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 RELBQ01201 579 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 FXYD3Q14802 87 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 SP6Q3SY56 376 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 AKIRIN2Q53H80 203 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 FBLN7Q53RD9 439 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 STPG2Q8N412 459 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 SLC35G3Q8N808 338 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 OR5M8Q8NGP6 311 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 OR1L8Q8NGR8 309 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 ZNF431Q8TF32 576 aaPredicted RBP6.37□□□□□ -1.39
LINC01397-201ENST00000554808 ABHD5Q8WTS1 349 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 MITD1Q8WV92 249 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 SRSF12Q8WXF0 261 aaKnown RBP6.37□□□□□ -1.39
LINC01397-201ENST00000554808 RITA1Q96K30 269 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 ZNF430Q9H8G1 570 aaPredicted RBP6.37□□□□□ -1.39
LINC01397-201ENST00000554808 TMEM14BQ9NUH8 114 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 FLVCR2Q9UPI3 526 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 FOXA2Q9Y261 457 aaPredicted RBP6.37□□□□□ -1.39
LINC01397-201ENST00000554808 A0A1B0GU03 582 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 A0A1W2PN81 502 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 FAM90A26D6RGX4 464 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 ATP6V0E1O15342 81 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 LY86O95711 162 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 P0C879 139 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 SULT1A3P0DMM9 295 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 SULT1A4P0DMN0 295 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 CHRNA7P36544 502 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 AWAT1Q58HT5 328 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 SELENOHQ8IZQ5 122 aaKnown RBP6.36□□□□□ -1.39
LINC01397-201ENST00000554808 VKORC1L1Q8N0U8 176 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 OR4X2Q8NGF9 303 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 OR52E5Q8NH55 327 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 CASTOR1Q8WTX7 329 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 WFDC12Q8WWY7 111 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 HSPB9Q9BQS6 159 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 QTRT1Q9BXR0 403 aaKnown RBP6.36□□□□□ -1.39
LINC01397-201ENST00000554808 WNT10AQ9GZT5 417 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 PARP11Q9NR21 331 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 TPSG1Q9NRR2 321 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.36□□□□□ -1.39
LINC01397-201ENST00000554808 SERTAD4Q9NUC0 356 aa6.36□□□□□ -1.39
LINC01397-201ENST00000554808 TRAV41A0A0B4J266 112 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 PSMB11A5LHX3 300 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 INS-IGF2F8WCM5 200 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 MED6O75586 246 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 BRI3O95415 125 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 IGKV1-5P01602 117 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 ELANEP08246 267 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 TRAPPC2P0DI81 140 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 TRAPPC2BP0DI82 140 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 MDKP21741 143 aaPredicted RBP6.35□□□□□ -1.39
LINC01397-201ENST00000554808 PROK1P58294 105 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 HSPE1P61604 102 aaKnown RBP6.35□□□□□ -1.39
LINC01397-201ENST00000554808 GNB1P62873 340 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 SMCO1Q147U7 214 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 AARDQ4LEZ3 155 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 PDLIM3Q53GG5 364 aaPredicted RBP6.35□□□□□ -1.39
LINC01397-201ENST00000554808 NMSQ5H8A3 153 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 FAM209BQ5JX69 171 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 TEX38Q6PEX7 206 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 UNQ5815/PRO19632Q6UWF5 114 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 C12orf54Q6X4T0 127 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 CENPVQ7Z7K6 275 aaPredicted RBP6.35□□□□□ -1.39
LINC01397-201ENST00000554808 C12orf45Q8N5I9 185 aaPredicted RBP6.35□□□□□ -1.39
LINC01397-201ENST00000554808 KLHDC1Q8N7A1 406 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 OR1L6Q8NGR2 347 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 GRPEL2Q8TAA5 225 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 LHFPL5Q8TAF8 219 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 CLCC1Q96S66 551 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 SLA2Q9H6Q3 261 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 OR51B2Q9Y5P1 312 aa6.35□□□□□ -1.39
LINC01397-201ENST00000554808 DBX1A6NMT0 343 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 NPIPB5A8MRT5 1133 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 FCN1O00602 326 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 FBXO24O75426 580 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 IGHG4P01861 327 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 OPN1MWP04001 364 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 OR9G9P0C7N8 305 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 OPN1MW2P0DN77 364 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 OPN1MW3P0DN78 364 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 HIST1H1BP16401 226 aaKnown RBP6.34□□□□□ -1.39
LINC01397-201ENST00000554808 SPCS3P61009 180 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 SSBP2P81877 361 aaPredicted RBP6.34□□□□□ -1.39
LINC01397-201ENST00000554808 ERHP84090 104 aaKnown RBP6.34□□□□□ -1.39
LINC01397-201ENST00000554808 PRCDQ00LT1 54 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 SRSF2Q01130 221 aaKnown RBP6.34□□□□□ -1.39
LINC01397-201ENST00000554808 PJVKQ0ZLH3 352 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 FOXE3Q13461 319 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 OXA1LQ15070 435 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 ECSCRQ19T08 205 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 MRGPRG-AS1Q2M3A8 158 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 ANKRD55Q3KP44 614 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 CXorf66Q5JRM2 361 aaPredicted RBP6.34□□□□□ -1.39
LINC01397-201ENST00000554808 LYZL2Q7Z4W2 148 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 NOXA1Q86UR1 476 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 LFNGQ8NES3 379 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 FAM110DQ8TAY7 271 aaPredicted RBP6.34□□□□□ -1.39
LINC01397-201ENST00000554808 PLEKHA3Q9HB20 300 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 ENY2Q9NPA8 101 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms