RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 KLF6Q99612 283 aaPredicted RBP1.25□□□□□ -2.21
SCFD1-213ENST00000554776 OR8D2Q9GZM6 311 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 CISHQ9NSE2 258 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 AK3Q9UIJ7 227 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 FUT9Q9Y231 359 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 SAMHD1Q9Y3Z3 626 aaKnown RBP1.25□□□□□ -2.21
SCFD1-213ENST00000554776 AMMECR1Q9Y4X0 333 aaPredicted RBP1.25□□□□□ -2.21
SCFD1-213ENST00000554776 STRCP1A6NGW2 1772 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 RTEL1-TNFRSF6BF6WH68 1400 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 FLT4P35916 1363 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 CUL9Q8IWT3 2517 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 IGLV3-9A0A075B6K5 115 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 TRAV38-1A0A0B4J264 116 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 A0A0J9YW62 118 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 SMIM23A6NLE4 172 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 E2F6O75461 281 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 ZNF705DP0CH99 300 aaPredicted RBP1.24□□□□□ -2.21
SCFD1-213ENST00000554776 KCNE1P15382 129 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 CDKN2CP42773 168 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 AQP4P55087 323 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 RAB14P61106 215 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 TRAPPC5Q8IUR0 188 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 ACOT12Q8WYK0 555 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 VCX3BQ9H321 246 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 TIMM9Q9Y5J7 89 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 RALGAPA2Q2PPJ7 1873 aa1.24□□□□□ -2.21
SCFD1-213ENST00000554776 NUP160Q12769 1436 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 ZNF532Q9HCE3 1301 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 HECW2Q9P2P5 1572 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 TRBV20OR9-2A0A075B6H5 130 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 ZNF860A6NHJ4 632 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 CHP2O43745 196 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 CREBL2O60519 120 aaPredicted RBP1.23□□□□□ -2.21
SCFD1-213ENST00000554776 S1PR2O95136 353 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 SRP19P09132 144 aaKnown RBP1.23□□□□□ -2.21
SCFD1-213ENST00000554776 MSNP26038 577 aaKnown RBP1.23□□□□□ -2.21
SCFD1-213ENST00000554776 HAAOP46952 286 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 SULT1A1P50225 295 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 CEBPGP53567 150 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 AESQ08117 197 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 GRK1Q15835 563 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 KCNJ8Q15842 424 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 KRTAP13-4Q3LI77 160 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 TMEM155Q4W5P6 130 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 PABPC1L2AQ5JQF8 200 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 Q6ZTI0 123 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 KTN1-AS1Q86SY8 53 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 ZNF676Q8N7Q3 588 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 ITFG2Q969R8 447 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 IMP4Q96G21 291 aaKnown RBP1.23□□□□□ -2.21
SCFD1-213ENST00000554776 ZNF625Q96I27 306 aaPredicted RBP1.23□□□□□ -2.21
SCFD1-213ENST00000554776 EFCAB1Q9HAE3 211 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 PLB1Q6P1J6 1458 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 ZFYVE9O95405 1425 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 PTPRSQ13332 1948 aa1.23□□□□□ -2.21
SCFD1-213ENST00000554776 KIAA2026Q5HYC2 2103 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 HECW1Q76N89 1606 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 CPAMD8Q8IZJ3 1885 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 ZFHX2Q9C0A1 2572 aaPredicted RBP1.22□□□□□ -2.21
SCFD1-213ENST00000554776 ITGB4P16144 1822 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 MAST2Q6P0Q8 1798 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 PTPRBP23467 1997 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 TRAV7A0A075B6U4 112 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 CLDN24A6NM45 220 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 ZNF705FA8MVS1 300 aaPredicted RBP1.22□□□□□ -2.21
SCFD1-213ENST00000554776 TRAPPC2LH3BP13 241 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 H7C2G1 150 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 PSMD12O00232 456 aaPredicted RBP1.22□□□□□ -2.21
SCFD1-213ENST00000554776 RPP14O95059 124 aaKnown RBP1.22□□□□□ -2.21
SCFD1-213ENST00000554776 TCRBP04435 133 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 SERPINA6P08185 405 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 OR5G3P0C626 314 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 ALDH3A1P30838 453 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 EVX1P49640 407 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 EIF2B2P49770 351 aaKnown RBP1.22□□□□□ -2.21
SCFD1-213ENST00000554776 IDH3GP51553 393 aaPredicted RBP1.22□□□□□ -2.21
SCFD1-213ENST00000554776 RPS20P60866 119 aaKnown RBP1.22□□□□□ -2.21
SCFD1-213ENST00000554776 LSM6P62312 80 aaKnown RBP1.22□□□□□ -2.21
SCFD1-213ENST00000554776 RANP62826 216 aaKnown RBP1.22□□□□□ -2.21
SCFD1-213ENST00000554776 CAV1Q03135 178 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 AKR1C1Q04828 323 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 HIST3H3Q16695 136 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 SYPL2Q5VXT5 272 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 GLT8D1Q68CQ7 371 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 LYZL1Q6UWQ5 148 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 C1orf158Q8N1D5 194 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 CLDN22Q8N7P3 220 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 ROPN1LQ96C74 230 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 C8orf76Q96K31 380 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 WDR61Q9GZS3 305 aaKnown RBP1.22□□□□□ -2.21
SCFD1-213ENST00000554776 OR51V1Q9H2C8 321 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 IL36BQ9NZH7 164 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 TP73-AS1Q9UF72 201 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 COL5A3P25940 1745 aaPredicted RBP1.22□□□□□ -2.21
SCFD1-213ENST00000554776 MALRD1Q5VYJ5 2156 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 GREB1Q4ZG55 1949 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 CCDC88AQ3V6T2 1871 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 DCCP43146 1447 aa1.22□□□□□ -2.21
SCFD1-213ENST00000554776 WRNQ14191 1432 aaPredicted RBP eCLIP1.22□□□□□ -2.21
SCFD1-213ENST00000554776 COL11A1P12107 1806 aaPredicted RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms