RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 OR8U9P0C7N5 309 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 GADD45AP24522 165 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 MC5RP33032 325 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 SDC2P34741 201 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 CHRNA7P36544 502 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 CDX1P47902 265 aaPredicted RBP3.19□□□□□ -1.9
VTI1B-203ENST00000554636 LUMP51884 338 aaPredicted RBP3.19□□□□□ -1.9
VTI1B-203ENST00000554636 CX3CL1P78423 397 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 MRPS15P82914 257 aaKnown RBP3.19□□□□□ -1.9
VTI1B-203ENST00000554636 RUNX1Q01196 453 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 ARFRP1Q13795 201 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 PSG5Q15238 335 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 NEDD8Q15843 81 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 MRGPRG-AS1Q2M3A8 158 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 SERTAD4-AS1Q5TG53 156 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 HACD4Q5VWC8 232 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 ZNF660Q6AZW8 331 aaPredicted RBP3.19□□□□□ -1.9
VTI1B-203ENST00000554636 GSG1LQ6UXU4 331 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 SMIM29Q86T20 159 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 TPRA1Q86W33 373 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 TCTEX1D1Q8N7M0 179 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 OR5H6Q8NGV6 325 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 ARPC1AQ92747 370 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 YIPF6Q96EC8 236 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 UBE2E2Q96LR5 201 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 TSNAXQ99598 290 aaKnown RBP3.19□□□□□ -1.9
VTI1B-203ENST00000554636 RNF5Q99942 180 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 FAM103A1Q9BTL3 118 aaKnown RBP3.19□□□□□ -1.9
VTI1B-203ENST00000554636 CENPOQ9BU64 300 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 MCRIP2Q9BUT9 160 aaKnown RBP3.19□□□□□ -1.9
VTI1B-203ENST00000554636 GON7Q9BXV9 100 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 ATG5Q9H1Y0 275 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 SLC35D1Q9NTN3 355 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 RHBDL2Q9NX52 303 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 METTL1Q9UBP6 276 aaKnown RBP3.19□□□□□ -1.9
VTI1B-203ENST00000554636 DAPK2Q9UIK4 370 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 ZNF221Q9UK13 617 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 SSR3Q9UNL2 185 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 FOXA2Q9Y261 457 aaPredicted RBP3.19□□□□□ -1.9
VTI1B-203ENST00000554636 VSIG4Q9Y279 399 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 RRP15Q9Y3B9 282 aaKnown RBP3.19□□□□□ -1.9
VTI1B-203ENST00000554636 NUBP2Q9Y5Y2 271 aa3.19□□□□□ -1.9
VTI1B-203ENST00000554636 DNAH1Q9P2D7 4330 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 A0A087WW49 117 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 IGKV1D-13A0A0B4J2D9 117 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 LOC100506127A0A0U1RQW1 187 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 TMEM235A6NFC5 223 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 TRIM64CA6NLI5 447 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 SRRM4A7MD48 611 aaKnown RBP3.18□□□□□ -1.9
VTI1B-203ENST00000554636 PRSS47A8MTI9 375 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 SCGNO76038 276 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 GAGE7O76087 117 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 NDUFB4O95168 129 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 HLA-DQB1P01920 261 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 LGALS1P09382 135 aaKnown RBP3.18□□□□□ -1.9
VTI1B-203ENST00000554636 GAGE12FP0CL80 117 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 GAGE12GP0CL81 117 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 GAGE12IP0CL82 117 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 IGKV1-13P0DP09 117 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 CD36P16671 472 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 DUTP33316 252 aaKnown RBP3.18□□□□□ -1.9
VTI1B-203ENST00000554636 TGFBR1P36897 503 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 RAB9AP51151 201 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 RAB25P57735 213 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 GNG2P59768 71 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 MXD1Q05195 221 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 ZNF616Q08AN1 781 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 GAGE1Q13065 139 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 GAGE4Q13068 117 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 EIF4EBP1Q13541 118 aaPredicted RBP3.18□□□□□ -1.9
VTI1B-203ENST00000554636 ARL6IP1Q15041 203 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 PLGLAQ15195 96 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 CDNFQ49AH0 187 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 C9orf66Q5T8R8 295 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 UNQ5815/PRO19632Q6UWF5 114 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 ZNF562Q6V9R5 426 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 PPP1R27Q86WC6 154 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 ZNF645Q8N7E2 425 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 LFNGQ8NES3 379 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 OR11H1Q8NG94 326 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 OR5M8Q8NGP6 311 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 OR1N2Q8NGR9 330 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 OR10J5Q8NHC4 309 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 CASTOR1Q8WTX7 329 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 FLYWCH2Q96CP2 140 aaKnown RBP3.18□□□□□ -1.9
VTI1B-203ENST00000554636 HARBI1Q96MB7 349 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 OR5B12Q96R08 314 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 CLCC1Q96S66 551 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 LYSTQ99698 3801 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 GINS4Q9BRT9 223 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 ALX4Q9H161 411 aaPredicted RBP3.18□□□□□ -1.9
VTI1B-203ENST00000554636 ETV7Q9Y603 341 aa3.18□□□□□ -1.9
VTI1B-203ENST00000554636 A0A0A6YYH2 397 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 A6NJ64 397 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 SEC14L6B5MCN3 397 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 H3BUA1 57 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 J3QRK9 145 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 BRI3O95415 125 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 CRYZL1O95825 349 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 IGHV3-11P01762 117 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms