RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PFN1P07737 140 aaKnown RBP4.92□□□□□ -1.62
VPS33B-203ENST00000554264 TUBG1P23258 451 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 GALR1P47211 349 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 IDH3GP51553 393 aaPredicted RBP4.92□□□□□ -1.62
VPS33B-203ENST00000554264 CEBPGP53567 150 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 UBE2NP61088 152 aaKnown RBP4.92□□□□□ -1.62
VPS33B-203ENST00000554264 PAFAH1B2P68402 229 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 PLGLB1Q02325 96 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 SLC38A11Q08AI6 406 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 GAMTQ14353 236 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 SLC10A1Q14973 349 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 VWC2Q2TAL6 325 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 CEACAM16Q2WEN9 425 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 C9orf152Q5JTZ5 239 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 ACTL10Q5JWF8 245 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 TRAT1Q6PIZ9 186 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 CLEC9AQ6UXN8 241 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 TMEM14EPQ6UXP3 125 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 C16orf47Q6ZP98 133 aaPredicted RBP4.92□□□□□ -1.62
VPS33B-203ENST00000554264 TMEM217Q8N7C4 229 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF709Q8N972 641 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 OR51G1Q8NGK1 321 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 OR4X1Q8NH49 305 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 OR2AE1Q8NHA4 323 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 ABHD5Q8WTS1 349 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 TAF15Q92804 592 aaKnown RBP eCLIP4.92□□□□□ -1.62
VPS33B-203ENST00000554264 GPR146Q96CH1 333 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 ADGRG7Q96K78 797 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 TUBG2Q9NRH3 451 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 KCNIP1Q9NZI2 227 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 HSPB7Q9UBY9 170 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 OR14J1Q9UGF5 321 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 BOKQ9UMX3 212 aaPredicted RBP4.92□□□□□ -1.62
VPS33B-203ENST00000554264 URGCP-MRPS24S4R325 110 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 ARL2-SNX15V9GYD0 113 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 NIPBLQ6KC79 2804 aaeCLIP4.92□□□□□ -1.62
VPS33B-203ENST00000554264 ABCA4P78363 2273 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 TRBV9A0A0B4J1U6 114 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 XKRY2A2RUG3 117 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 A6NNC1 897 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 J3QT63 122 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 MRPL33O75394 65 aaKnown RBP4.91□□□□□ -1.62
VPS33B-203ENST00000554264 TMEM50AO95807 157 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 MT-CO2P00403 227 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 OPN1LWP04000 364 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 GZMBP10144 247 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 B4GALT1P15291 398 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 BTF3P20290 206 aaKnown RBP4.91□□□□□ -1.62
VPS33B-203ENST00000554264 BCL3P20749 454 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 OR10J1P30954 320 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 PROK1P58294 105 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 RUNX1Q01196 453 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 ADIRFQ15847 76 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 GABRA6Q16445 453 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 DEFB113Q30KQ7 82 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 PRAMEF20Q5VT98 475 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF343Q6P1L6 599 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF66Q6ZN08 573 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 Q71RC1 249 aaPredicted RBP4.91□□□□□ -1.62
VPS33B-203ENST00000554264 NUFIP2Q7Z417 695 aaKnown RBP4.91□□□□□ -1.62
VPS33B-203ENST00000554264 ODF3L1Q8IXM7 274 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 FAM58AQ8N1B3 248 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 RPRMLQ8N4K4 120 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 RNF152Q8N8N0 203 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 WFDC11Q8NEX6 87 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 OR10P1Q8NGE3 313 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 OR51H1Q8NH63 302 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 MRPL30Q8TCC3 161 aaKnown RBP4.91□□□□□ -1.62
VPS33B-203ENST00000554264 FAM222BQ8WU58 562 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 SNX22Q96L94 193 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 SMR3AQ99954 134 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 RTL8AQ9BWD3 113 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 OR51B6Q9H340 312 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF665Q9H7R5 613 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 CCL28Q9NRJ3 127 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.91□□□□□ -1.62
VPS33B-203ENST00000554264 OR6C3Q9NZP0 311 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 CACNG5Q9UF02 275 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 LY96Q9Y6Y9 160 aa4.91□□□□□ -1.62
VPS33B-203ENST00000554264 ACANP16112 2415 aa4.9□□□□□ -1.62
VPS33B-203ENST00000554264 IGKV1D-13A0A0B4J2D9 117 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 A0A1B0GV50 99 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 C5orf63A6NC05 138 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 TMEM210A6NLX4 147 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 M0R143 59 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 NXPH3O95157 252 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 GOSR1O95249 250 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 AMBPP02760 352 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 SCTP09683 121 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 PGA5P0DJD9 388 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 IGKV1-13P0DP09 117 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 CCL3P10147 92 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 SELEP16581 610 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 CNN1P51911 297 aaKnown RBP4.9□□□□□ -1.63
VPS33B-203ENST00000554264 ATP5IP56385 69 aaPredicted RBP4.9□□□□□ -1.63
VPS33B-203ENST00000554264 B3GALT5-AS1P59052 145 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 ERVFC1-1P60608 527 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 NUTF2P61970 127 aaKnown RBP4.9□□□□□ -1.63
VPS33B-203ENST00000554264 PPP1CBP62140 327 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 RPL23P62829 140 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms