RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 DEFA4P12838 97 aa10.11□□□□□ -0.79
NEDD1-206ENST00000554226 CD36P16671 472 aa10.11□□□□□ -0.79
NEDD1-206ENST00000554226 RANBP1P43487 201 aa10.11□□□□□ -0.79
NEDD1-206ENST00000554226 PSMD7P51665 324 aa10.11□□□□□ -0.79
NEDD1-206ENST00000554226 BRWD1-AS2P59051 145 aa10.11□□□□□ -0.79
NEDD1-206ENST00000554226 RPL30P62888 115 aaKnown RBP10.11□□□□□ -0.79
NEDD1-206ENST00000554226 RPL8P62917 257 aaKnown RBP10.11□□□□□ -0.79
NEDD1-206ENST00000554226 EIF4EBP1Q13541 118 aaPredicted RBP10.11□□□□□ -0.79
NEDD1-206ENST00000554226 PQLC1Q8N2U9 271 aa10.11□□□□□ -0.79
NEDD1-206ENST00000554226 OR5B3Q8NH48 314 aa10.11□□□□□ -0.79
NEDD1-206ENST00000554226 RAB3CQ96E17 227 aa10.11□□□□□ -0.79
NEDD1-206ENST00000554226 PLCXD1Q9NUJ7 323 aa10.11□□□□□ -0.79
NEDD1-206ENST00000554226 THYN1Q9P016 225 aa10.11□□□□□ -0.79
NEDD1-206ENST00000554226 RBMX2Q9Y388 322 aaKnown RBP10.11□□□□□ -0.79
NEDD1-206ENST00000554226 IGLC7A0M8Q6 106 aa10.1□□□□□ -0.79
NEDD1-206ENST00000554226 NDUFA4O00483 81 aa10.1□□□□□ -0.79
NEDD1-206ENST00000554226 DENRO43583 198 aaKnown RBP10.1□□□□□ -0.79
NEDD1-206ENST00000554226 HLA-DQB1P01920 261 aa10.1□□□□□ -0.79
NEDD1-206ENST00000554226 HLA-GP17693 338 aa10.1□□□□□ -0.79
NEDD1-206ENST00000554226 RAB11BQ15907 218 aa10.1□□□□□ -0.79
NEDD1-206ENST00000554226 LAIR2Q6ISS4 152 aa10.1□□□□□ -0.79
NEDD1-206ENST00000554226 SPSB3Q6PJ21 355 aa10.1□□□□□ -0.79
NEDD1-206ENST00000554226 APRG1Q8IVJ8 170 aa10.1□□□□□ -0.79
NEDD1-206ENST00000554226 OR4A5Q8NH83 315 aa10.1□□□□□ -0.79
NEDD1-206ENST00000554226 FAM3DQ96BQ1 224 aa10.1□□□□□ -0.79
NEDD1-206ENST00000554226 BSCL2Q96G97 398 aaPredicted RBP10.1□□□□□ -0.79
NEDD1-206ENST00000554226 HSD17B10Q99714 261 aaKnown RBP10.1□□□□□ -0.79
NEDD1-206ENST00000554226 FKBP14Q9NWM8 211 aa10.1□□□□□ -0.79
NEDD1-206ENST00000554226 BET1LQ9NYM9 111 aa10.1□□□□□ -0.79
NEDD1-206ENST00000554226 ETV7Q9Y603 341 aa10.1□□□□□ -0.79
NEDD1-206ENST00000554226 IGHV3-35A0A0C4DH35 117 aa10.09□□□□□ -0.79
NEDD1-206ENST00000554226 C15orf62A8K5M9 175 aa10.09□□□□□ -0.79
NEDD1-206ENST00000554226 OR2B8PP59922 312 aa10.09□□□□□ -0.79
NEDD1-206ENST00000554226 C2orf76Q3KRA6 126 aa10.09□□□□□ -0.79
NEDD1-206ENST00000554226 AHSA2Q719I0 299 aa10.09□□□□□ -0.79
NEDD1-206ENST00000554226 Q8NAQ8 132 aa10.09□□□□□ -0.79
NEDD1-206ENST00000554226 OR2W1Q9Y3N9 320 aa10.09□□□□□ -0.79
NEDD1-206ENST00000554226 IGKV1D-8A0A087WSZ0 117 aa10.08□□□□□ -0.8
NEDD1-206ENST00000554226 RAB27BO00194 218 aa10.08□□□□□ -0.8
NEDD1-206ENST00000554226 HRASP01112 189 aa10.08□□□□□ -0.8
NEDD1-206ENST00000554226 REG1AP05451 166 aa10.08□□□□□ -0.8
NEDD1-206ENST00000554226 CTSDP07339 412 aaPredicted RBP10.08□□□□□ -0.8
NEDD1-206ENST00000554226 HIST1H1DP16402 221 aaKnown RBP10.08□□□□□ -0.8
NEDD1-206ENST00000554226 OR2B11Q5JQS5 317 aa10.08□□□□□ -0.8
NEDD1-206ENST00000554226 SSX9Q7RTT3 188 aa10.08□□□□□ -0.8
NEDD1-206ENST00000554226 NR2C2APQ86WQ0 139 aa10.08□□□□□ -0.8
NEDD1-206ENST00000554226 OR10R2Q8NGX6 335 aa10.08□□□□□ -0.8
NEDD1-206ENST00000554226 MAFIPQ8WZ33 124 aa10.08□□□□□ -0.8
NEDD1-206ENST00000554226 RNF126Q9BV68 326 aa10.08□□□□□ -0.8
NEDD1-206ENST00000554226 MND1Q9BWT6 205 aa10.08□□□□□ -0.8
NEDD1-206ENST00000554226 S100A14Q9HCY8 104 aa10.08□□□□□ -0.8
NEDD1-206ENST00000554226 RAB22AQ9UL26 194 aa10.08□□□□□ -0.8
NEDD1-206ENST00000554226 LSM2Q9Y333 95 aaKnown RBP10.08□□□□□ -0.8
NEDD1-206ENST00000554226 IGHV4-4A0A075B6R2 117 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 TMEM272A0A1B0GTI8 110 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 C15orf61A6NNL5 157 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 MRPS14O60783 128 aaKnown RBP10.07□□□□□ -0.8
NEDD1-206ENST00000554226 ARL6IP5O75915 188 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 AMBPP02760 352 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 CTXN2P0C2S0 81 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 DTYMKP23919 212 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 GADD45AP24522 165 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 CLDN12P56749 244 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 PLA2G7Q13093 441 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 TMEM187Q14656 261 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 ZNF124Q15973 351 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 PVRIGQ6DKI7 326 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 TMEM91Q6ZNR0 172 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 AIFM2Q9BRQ8 373 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 SMPXQ9UHP9 88 aa10.07□□□□□ -0.8
NEDD1-206ENST00000554226 AK6Q9Y3D8 172 aaKnown RBP10.07□□□□□ -0.8
NEDD1-206ENST00000554226 TRAV10A0A0B4J240 114 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 F8W735 103 aaPredicted RBP10.06□□□□□ -0.8
NEDD1-206ENST00000554226 DEFB4AO15263 64 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 CYB5BO43169 146 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 GNB3P16520 340 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 SPHARQ15513 63 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 MSMO1Q15800 293 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 POU2AF1Q16633 256 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 LGALS9BQ3B8N2 356 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 TIMM50Q3ZCQ8 353 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 THOC7Q6I9Y2 204 aaKnown RBP10.06□□□□□ -0.8
NEDD1-206ENST00000554226 ZNF66Q6ZN08 573 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 HSD17B13Q7Z5P4 300 aaPredicted RBP10.06□□□□□ -0.8
NEDD1-206ENST00000554226 ZNF575Q86XF7 245 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 POM121L12Q8N7R1 296 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 GDPD1Q8N9F7 314 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 CYGBQ8WWM9 190 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 ZNF414Q96IQ9 312 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 RNF2Q99496 336 aa10.06□□□□□ -0.8
NEDD1-206ENST00000554226 IGKV1D-13A0A0B4J2D9 117 aa10.05□□□□□ -0.8
NEDD1-206ENST00000554226 OR2T8A6NH00 312 aa10.05□□□□□ -0.8
NEDD1-206ENST00000554226 RBFOX2O43251 390 aaKnown RBP eCLIP10.05□□□□□ -0.8
NEDD1-206ENST00000554226 CA1P00915 261 aaPredicted RBP10.05□□□□□ -0.8
NEDD1-206ENST00000554226 P0DMU3 169 aa10.05□□□□□ -0.8
NEDD1-206ENST00000554226 FAM231AP0DMU4 169 aa10.05□□□□□ -0.8
NEDD1-206ENST00000554226 FAM231CP0DMU5 169 aa10.05□□□□□ -0.8
NEDD1-206ENST00000554226 IGKV1-13P0DP09 117 aa10.05□□□□□ -0.8
NEDD1-206ENST00000554226 RPA2P15927 270 aa10.05□□□□□ -0.8
NEDD1-206ENST00000554226 CRHBPP24387 322 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms