RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 APELAP0DMC3 54 aa11.22□□□□□ -0.61
PRKCH-206ENST00000553830 HLA-GP17693 338 aa11.22□□□□□ -0.61
PRKCH-206ENST00000553830 MRGPRG-AS1Q2M3A8 158 aa11.22□□□□□ -0.61
PRKCH-206ENST00000553830 CXorf66Q5JRM2 361 aaPredicted RBP11.22□□□□□ -0.61
PRKCH-206ENST00000553830 C11orf87Q6NUJ2 197 aa11.22□□□□□ -0.61
PRKCH-206ENST00000553830 MMD2Q8IY49 270 aa11.22□□□□□ -0.61
PRKCH-206ENST00000553830 FAM71E2Q8N5Q1 922 aa11.22□□□□□ -0.61
PRKCH-206ENST00000553830 OR8H1Q8NGG4 311 aa11.22□□□□□ -0.61
PRKCH-206ENST00000553830 GRPEL2Q8TAA5 225 aa11.22□□□□□ -0.61
PRKCH-206ENST00000553830 COMMD5Q9GZQ3 224 aa11.22□□□□□ -0.61
PRKCH-206ENST00000553830 RANGRFQ9HD47 186 aaPredicted RBP11.22□□□□□ -0.61
PRKCH-206ENST00000553830 ESM1Q9NQ30 184 aa11.22□□□□□ -0.61
PRKCH-206ENST00000553830 TEX50A0A1B0GTY4 177 aa11.21□□□□□ -0.61
PRKCH-206ENST00000553830 CEBPZOSA8MTT3 80 aa11.21□□□□□ -0.61
PRKCH-206ENST00000553830 WRBO00258 174 aa11.21□□□□□ -0.61
PRKCH-206ENST00000553830 SSSCA1O60232 199 aa11.21□□□□□ -0.61
PRKCH-206ENST00000553830 TRAPPC2P0DI81 140 aa11.21□□□□□ -0.61
PRKCH-206ENST00000553830 TRAPPC2BP0DI82 140 aa11.21□□□□□ -0.61
PRKCH-206ENST00000553830 IAPPP10997 89 aa11.21□□□□□ -0.61
PRKCH-206ENST00000553830 NKX2-1P43699 371 aaPredicted RBP11.21□□□□□ -0.61
PRKCH-206ENST00000553830 HOXA1P49639 335 aaPredicted RBP11.21□□□□□ -0.61
PRKCH-206ENST00000553830 CD300CQ08708 224 aa11.21□□□□□ -0.61
PRKCH-206ENST00000553830 RAB32Q13637 225 aa11.21□□□□□ -0.61
PRKCH-206ENST00000553830 OR4D5Q8NGN0 318 aa11.21□□□□□ -0.61
PRKCH-206ENST00000553830 HSPB9Q9BQS6 159 aa11.21□□□□□ -0.61
PRKCH-206ENST00000553830 RBKSQ9H477 322 aa11.21□□□□□ -0.61
PRKCH-206ENST00000553830 FOXA2Q9Y261 457 aaPredicted RBP11.21□□□□□ -0.61
PRKCH-206ENST00000553830 RCL1Q9Y2P8 373 aaKnown RBP11.21□□□□□ -0.61
PRKCH-206ENST00000553830 GPR137BO60478 399 aa11.2□□□□□ -0.62
PRKCH-206ENST00000553830 PFDN1O60925 122 aa11.2□□□□□ -0.62
PRKCH-206ENST00000553830 PITX3O75364 302 aa11.2□□□□□ -0.62
PRKCH-206ENST00000553830 MBPP02686 304 aaPredicted RBP11.2□□□□□ -0.62
PRKCH-206ENST00000553830 IL6RP08887 468 aaPredicted RBP11.2□□□□□ -0.62
PRKCH-206ENST00000553830 GIPP09681 153 aaPredicted RBP11.2□□□□□ -0.62
PRKCH-206ENST00000553830 FAM157CP0CG43 387 aa11.2□□□□□ -0.62
PRKCH-206ENST00000553830 SLC25A6P12236 298 aa11.2□□□□□ -0.62
PRKCH-206ENST00000553830 RPL27AP46776 148 aaKnown RBP11.2□□□□□ -0.62
PRKCH-206ENST00000553830 POLR2GP62487 172 aaKnown RBP eCLIP11.2□□□□□ -0.62
PRKCH-206ENST00000553830 FXYD3Q14802 87 aa11.2□□□□□ -0.62
PRKCH-206ENST00000553830 ARSJQ5FYB0 599 aaPredicted RBP11.2□□□□□ -0.62
PRKCH-206ENST00000553830 C16orf82Q7Z2V1 217 aa11.2□□□□□ -0.62
PRKCH-206ENST00000553830 FAM103A1Q9BTL3 118 aaKnown RBP11.2□□□□□ -0.62
PRKCH-206ENST00000553830 NMES1Q9C002 83 aa11.2□□□□□ -0.62
PRKCH-206ENST00000553830 PARP11Q9NR21 331 aa11.2□□□□□ -0.62
PRKCH-206ENST00000553830 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
PRKCH-206ENST00000553830 POMT1Q9Y6A1 747 aa11.2□□□□□ -0.62
PRKCH-206ENST00000553830 FGF16O43320 207 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 AMY1AP04745 511 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 FGF2P09038 288 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 BLCAPP62952 87 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 CX3CL1P78423 397 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 CYCSP99999 105 aaKnown RBP11.19□□□□□ -0.62
PRKCH-206ENST00000553830 NDPQ00604 133 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 SRSF2Q01130 221 aaKnown RBP11.19□□□□□ -0.62
PRKCH-206ENST00000553830 TUSC1Q2TAM9 212 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 OR1L8Q8NGR8 309 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 OR2T35Q8NGX2 323 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 PPP1R1CQ8WVI7 109 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 SRSF12Q8WXF0 261 aaKnown RBP11.19□□□□□ -0.62
PRKCH-206ENST00000553830 ARPC1AQ92747 370 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 TAF15Q92804 592 aaKnown RBP eCLIP11.19□□□□□ -0.62
PRKCH-206ENST00000553830 ST6GAL2Q96JF0 529 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 ENY2Q9NPA8 101 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 COA4Q9NYJ1 87 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 FKBP11Q9NYL4 201 aa11.19□□□□□ -0.62
PRKCH-206ENST00000553830 IGHV7-81A0A0B4J1V7 117 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 LINC01548A6NM66 108 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 E7EUB6 86 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 K7EPK0 472 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 M0QZK8 103 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 HLA-DRB1P01911 266 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 REG1AP05451 166 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 MAS1LP35410 378 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 COMPP49747 757 aaPredicted RBP11.18□□□□□ -0.62
PRKCH-206ENST00000553830 SPCS3P61009 180 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 RAP2BP61225 183 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 HSPE1P61604 102 aaKnown RBP11.18□□□□□ -0.62
PRKCH-206ENST00000553830 SSBP2P81877 361 aaPredicted RBP11.18□□□□□ -0.62
PRKCH-206ENST00000553830 TNFRSF9Q07011 255 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 Q5BKY6 102 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 Q6ZS46 218 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 TMEM86BQ8N661 226 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 OR10W1Q8NGF6 305 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 PLEKHA3Q9HB20 300 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 HSPB7Q9UBY9 170 aa11.18□□□□□ -0.62
PRKCH-206ENST00000553830 PAIP2BQ9ULR5 123 aaKnown RBP11.18□□□□□ -0.62
PRKCH-206ENST00000553830 A0A1B0GW64 132 aa11.17□□□□□ -0.62
PRKCH-206ENST00000553830 MSGN1A6NI15 193 aa11.17□□□□□ -0.62
PRKCH-206ENST00000553830 CGB1A6NKQ9 187 aa11.17□□□□□ -0.62
PRKCH-206ENST00000553830 L7N2F9 121 aa11.17□□□□□ -0.62
PRKCH-206ENST00000553830 SYNGR2O43760 224 aa11.17□□□□□ -0.62
PRKCH-206ENST00000553830 MED6O75586 246 aa11.17□□□□□ -0.62
PRKCH-206ENST00000553830 PSMB6P28072 239 aa11.17□□□□□ -0.62
PRKCH-206ENST00000553830 HILS1P60008 231 aa11.17□□□□□ -0.62
PRKCH-206ENST00000553830 VAMP2P63027 116 aa11.17□□□□□ -0.62
PRKCH-206ENST00000553830 SRSF4Q08170 494 aaKnown RBP11.17□□□□□ -0.62
PRKCH-206ENST00000553830 IL15RAQ13261 267 aa11.17□□□□□ -0.62
PRKCH-206ENST00000553830 ECSCRQ19T08 205 aa11.17□□□□□ -0.62
PRKCH-206ENST00000553830 TMEM95Q3KNT9 176 aa11.17□□□□□ -0.62
PRKCH-206ENST00000553830 ZNF429Q86V71 674 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms