RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 CHRNA7P36544 502 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 CEACAM3P40198 252 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 HOXA1P49639 335 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-221ENST00000553498 PPT1P50897 306 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 EFNA4P52798 201 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 ARL16Q0P5N6 197 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 RAB31Q13636 194 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 TMEM249Q2WGJ8 235 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 VMA21Q3ZAQ7 101 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 KHDC3LQ587J8 217 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 SP5Q6BEB4 398 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-221ENST00000553498 OR8G2PQ6IF36 304 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 ETV3LQ6ZN32 361 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 C11orf42Q8N5U0 333 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 SLC24A4Q8NFF2 622 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 TMEM167AQ8TBQ9 72 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 HARBI1Q96MB7 349 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 COMMD5Q9GZQ3 224 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 EIF5A2Q9GZV4 153 aaKnown RBP5.94□□□□□ -1.46
ATXN3-221ENST00000553498 SLC35B3Q9H1N7 401 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 PLEKHA3Q9HB20 300 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 NPVFQ9HCQ7 196 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 WDR83OSQ9Y284 106 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 OR51B2Q9Y5P1 312 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 PTPRZ1P23471 2315 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-221ENST00000553498 IGHV2-26A0A0B4J1V2 119 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 UBE2L5PA0A1B0GUS4 154 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 A0A1W2PPE3 182 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 RBFOX3A6NFN3 312 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 OOSP1A8MZH6 123 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 CYB5BO43169 146 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 IGHV3-7P01780 117 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 HSPB1P04792 205 aaKnown RBP5.93□□□□□ -1.46
ATXN3-221ENST00000553498 SFTA3P0C7M3 94 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 SAA1P0DJI8 122 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-221ENST00000553498 NPY1RP25929 384 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 OPRK1P41145 380 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 GPR6P46095 362 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-221ENST00000553498 COMPP49747 757 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-221ENST00000553498 SUB1P53999 127 aaKnown RBP eCLIP5.93□□□□□ -1.46
ATXN3-221ENST00000553498 LINC00205P59089 165 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 RPL8P62917 257 aaKnown RBP5.93□□□□□ -1.46
ATXN3-221ENST00000553498 ERHP84090 104 aaKnown RBP5.93□□□□□ -1.46
ATXN3-221ENST00000553498 RUNX1Q01196 453 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 DEFA5Q01523 94 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 ZNF124Q15973 351 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 HLA-DRB5Q30154 266 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 BSXQ3C1V8 233 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 C2orf83Q53S99 150 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 RBMS3Q6XE24 437 aaKnown RBP5.93□□□□□ -1.46
ATXN3-221ENST00000553498 SSX9Q7RTT3 188 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 TEX45Q8NA69 505 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 OR11H6Q8NGC7 330 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 OR1L8Q8NGR8 309 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 SUN5Q8TC36 379 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 SFT2D1Q8WV19 159 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 CACNG8Q8WXS5 425 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 P2RX4Q99571 388 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 SSBP3Q9BWW4 388 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-221ENST00000553498 NPCDR1Q9BY65 106 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 MRPL20Q9BYC9 149 aaKnown RBP5.93□□□□□ -1.46
ATXN3-221ENST00000553498 NKX6-2Q9C056 277 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-221ENST00000553498 MS4A7Q9GZW8 240 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-221ENST00000553498 NARFLQ9H6Q4 476 aa5.93□□□□□ -1.46
ATXN3-221ENST00000553498 KLF2Q9Y5W3 355 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-221ENST00000553498 CUL9Q8IWT3 2517 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 LOC105371242A0A075B767 164 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 FAM157AC9JC47 383 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 PRSS46E5RG02 174 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 BUB1B-PAK6H3BSN5 160 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 ENSAO43768 121 aaKnown RBP5.92□□□□□ -1.46
ATXN3-221ENST00000553498 IGKV1-16P04430 117 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 IFNA4P05014 189 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 FGF7P21781 194 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 PRTN3P24158 256 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 GPX4P36969 197 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-221ENST00000553498 ACOT6Q3I5F7 207 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-221ENST00000553498 ZNF506Q5JVG8 444 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 SPSB3Q6PJ21 355 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 MMD2Q8IY49 270 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 VKORC1L1Q8N0U8 176 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 RNASEH2CQ8TDP1 164 aaKnown RBP5.92□□□□□ -1.46
ATXN3-221ENST00000553498 SRSF8Q9BRL6 282 aaKnown RBP5.92□□□□□ -1.46
ATXN3-221ENST00000553498 C19orf24Q9BVV8 132 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 SCRT1Q9BWW7 348 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 ACTR3CQ9C0K3 210 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-221ENST00000553498 NDUFA4L2Q9NRX3 87 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 RPRMQ9NS64 109 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 INSIG2Q9Y5U4 225 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 URB1O60287 2271 aaKnown RBP5.92□□□□□ -1.46
ATXN3-221ENST00000553498 ATMQ13315 3056 aa5.92□□□□□ -1.46
ATXN3-221ENST00000553498 TRAV3A0A0B4J244 114 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 CTXND1A0A1B0GTU2 59 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 TEX50A0A1B0GTY4 177 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 SEC14L6B5MCN3 397 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 LYNX1G3V0Z9 82 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 LY6LH3BQJ8 138 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 OVOL3O00110 214 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 NDUFS8O00217 210 aa5.91□□□□□ -1.46
ATXN3-221ENST00000553498 AGPAT2O15120 278 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms