RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 KLHDC1Q8N7A1 406 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 DMBX1Q8NFW5 382 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 OR5AU1Q8NGC0 362 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 OR11H4Q8NGC9 324 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 OR4A4PQ8NGN8 299 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 OR13F1Q8NGS4 319 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 RTN4IP1Q8WWV3 396 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-220ENST00000553491 PTX4Q96A99 478 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 BCL7BQ9BQE9 202 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 PARP12Q9H0J9 701 aaKnown RBP3.69□□□□□ -1.82
ATXN3-220ENST00000553491 C16orf95Q9H693 158 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 LINC00574Q9H8X3 128 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 ZFP57Q9NU63 452 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 RDH8Q9NYR8 311 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 PIPOXQ9P0Z9 390 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 JPT1Q9UK76 154 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 SPATA2Q9UM82 520 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 KCNK7Q9Y2U2 307 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 TMED3Q9Y3Q3 217 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 ETV7Q9Y603 341 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 IGKV1D-8A0A087WSZ0 117 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 TRBV6-6A0A0A6YYG2 114 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 IFITM10A6NMD0 228 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 FOXI3A8MTJ6 420 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-220ENST00000553491 MFNGO00587 321 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 TXNL1O43396 289 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 LANCL1O43813 399 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 OR2F2O95006 317 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 CNIH1O95406 144 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 DIRAS3O95661 229 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 EIF4EP06730 217 aaKnown RBP3.68□□□□□ -1.82
ATXN3-220ENST00000553491 SAA2P0DJI9 122 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-220ENST00000553491 CD28P10747 220 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 ELK1P19419 428 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 CNTFRP26992 372 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 CD1BP29016 333 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 DYNLT3P51808 116 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 LUMP51884 338 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-220ENST00000553491 FXYD4P59646 89 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 KRTAP10-3P60369 221 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 TSPAN5P62079 268 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 GNB1P62873 340 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 PAX5Q02548 391 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 ZNF816Q0VGE8 651 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-220ENST00000553491 CBX3Q13185 183 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 HERPUD1Q15011 391 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 MMDQ15546 238 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 TMEM30BQ3MIR4 351 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 Q3ZCU0 254 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 OR2B11Q5JQS5 317 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 ZNF880Q6PDB4 577 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 FAM131AQ6UXB0 335 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 SLC35E3Q7Z769 313 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 ZNF554Q86TJ5 538 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 ZNF329Q86UD4 541 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 GAPTQ8N292 157 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 LINC00311Q8N616 119 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 GVQW1Q8N7I0 195 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 MAPKAPK5-AS1Q8N8E1 139 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 ZNF439Q8NDP4 499 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 BEST4Q8NFU0 473 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 ACOT12Q8WYK0 555 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 AP3S1Q92572 193 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 SLC25A46Q96AG3 418 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 NOL4LQ96MY1 436 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-220ENST00000553491 MRPL20Q9BYC9 149 aaKnown RBP3.68□□□□□ -1.82
ATXN3-220ENST00000553491 OR2D2Q9H210 308 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 AUNIPQ9H7T9 357 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 Q9H8V8 135 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 ZNF702PQ9H963 129 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 ZNF355PQ9NSJ1 428 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 WDR83OSQ9Y284 106 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 MOB4Q9Y3A3 225 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 SVEP1Q4LDE5 3571 aa3.68□□□□□ -1.82
ATXN3-220ENST00000553491 TENM1Q9UKZ4 2725 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 TRBV6-7A0A0A0MS04 114 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 IGKV1-6A0A0C4DH72 117 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 PSMB11A5LHX3 300 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 M0QZK8 103 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 TNFSF12O43508 249 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 SSX5O60225 188 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 PFDN1O60925 122 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 TSHBP01222 138 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 APOA2P02652 100 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 CTXN2P0C2S0 81 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 CT45A6P0DMU7 189 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 CT45A5P0DMU8 189 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 CT45A7P0DMV0 189 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 DTYMKP23919 212 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 HLA-DMAP28067 261 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 FCGR2CP31995 323 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 CBX5P45973 191 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 TMBIM6P55061 237 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 TAS2R20P59543 309 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 ACTBP60709 375 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 HERV-K104P61576 105 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 SLC35B1P78383 322 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 DLK1P80370 383 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 SPCS2Q15005 226 aa3.67□□□□□ -1.82
ATXN3-220ENST00000553491 LBHQ53QV2 105 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms