RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SAA2-SAA4A0A096LPE2 208 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 hADV38S2A0JD32 116 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 PRRG2O14669 202 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 HIST1H2BKO60814 126 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 HIST1H2BJP06899 126 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 SAA2P0DJI9 122 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-205ENST00000553474 CD99P14209 185 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 HIST1H2BOP23527 126 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 HIST1H2BBP33778 126 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 HIST1H2BDP58876 126 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 HIST1H2BCP62807 126 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 RPL23P62829 140 aaKnown RBP10.63□□□□□ -0.71
SHMT2-205ENST00000553474 MRPS11P82912 194 aaKnown RBP10.63□□□□□ -0.71
SHMT2-205ENST00000553474 TLE1Q04724 770 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 MEF2CQ06413 473 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-205ENST00000553474 RAB31Q13636 194 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 ADIRFQ15847 76 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 HIST2H2BEQ16778 126 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-205ENST00000553474 HIST1H2BHQ93079 126 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 SNRNP40Q96DI7 357 aaKnown RBP10.63□□□□□ -0.71
SHMT2-205ENST00000553474 OR5B12Q96R08 314 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 HIST1H2BNQ99877 126 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 HIST1H2BMQ99879 126 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 SSX3Q99909 188 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 TMEM204Q9BSN7 226 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 CHODLQ9H9P2 273 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 ENY2Q9NPA8 101 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 FKBP11Q9NYL4 201 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 LSM4Q9Y4Z0 139 aaKnown RBP10.63□□□□□ -0.71
SHMT2-205ENST00000553474 LINC00312Q9Y6C7 94 aa10.63□□□□□ -0.71
SHMT2-205ENST00000553474 TET2Q6N021 2002 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-205ENST00000553474 RP1L1Q8IWN7 2480 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-205ENST00000553474 NKX6-3A6NJ46 265 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 C11orf94C9JXX5 98 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 TMPRSS2O15393 492 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 DYSFO75923 2080 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 SLC25A48Q6ZT89 311 aaKnown RBP10.62□□□□□ -0.71
SHMT2-205ENST00000553474 SSX9Q7RTT3 188 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 RPRMLQ8N4K4 120 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 GAL3ST2Q9H3Q3 398 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 SRD5A3Q9H8P0 318 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 GAR1Q9NY12 217 aaKnown RBP10.62□□□□□ -0.71
SHMT2-205ENST00000553474 RPUSD1Q9UJJ7 312 aaKnown RBP10.62□□□□□ -0.71
SHMT2-205ENST00000553474 C16orf97H3BN30 126 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 H7BYZ3 331 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 PAGE4O60829 102 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 CLN5O75503 358 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 CXorf1O96002 111 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 TRGC2P03986 189 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 PRB1P04280 392 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 PFN1P07737 140 aaKnown RBP10.62□□□□□ -0.71
SHMT2-205ENST00000553474 IL6RP08887 468 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-205ENST00000553474 S100A2P29034 98 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 RTL8BQ17RB0 113 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 SPRNQ5BIV9 151 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 SPINK9Q5DT21 86 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 OR4A47Q6IF82 309 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 TEPPQ6URK8 271 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 SLC24A4Q8NFF2 622 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 RPUSD4Q96CM3 377 aaKnown RBP10.62□□□□□ -0.71
SHMT2-205ENST00000553474 BBC3Q96PG8 261 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-205ENST00000553474 GGTLC1Q9BX51 225 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 OR51M1Q9H341 326 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 PLCE1Q9P212 2302 aa10.62□□□□□ -0.71
SHMT2-205ENST00000553474 TRAV38-1A0A0B4J264 116 aa10.61□□□□□ -0.71
SHMT2-205ENST00000553474 VSTM5A8MXK1 200 aa10.61□□□□□ -0.71
SHMT2-205ENST00000553474 RRHO14718 337 aa10.61□□□□□ -0.71
SHMT2-205ENST00000553474 PPP1R2P9O14990 202 aa10.61□□□□□ -0.71
SHMT2-205ENST00000553474 SLC31A2O15432 143 aa10.61□□□□□ -0.71
SHMT2-205ENST00000553474 STAG3L2P0CL84 134 aa10.61□□□□□ -0.71
SHMT2-205ENST00000553474 STAG3L3P0CL85 134 aa10.61□□□□□ -0.71
SHMT2-205ENST00000553474 NPY1RP25929 384 aa10.61□□□□□ -0.71
SHMT2-205ENST00000553474 SRP14P37108 136 aaKnown RBP10.61□□□□□ -0.71
SHMT2-205ENST00000553474 FAM27E3Q08E93 113 aa10.61□□□□□ -0.71
SHMT2-205ENST00000553474 HNF4GQ14541 408 aa10.61□□□□□ -0.71
SHMT2-205ENST00000553474 OR51G1Q8NGK1 321 aa10.61□□□□□ -0.71
SHMT2-205ENST00000553474 IMMP2LQ96T52 175 aa10.61□□□□□ -0.71
SHMT2-205ENST00000553474 ARL2-SNX15V9GYD0 113 aa10.61□□□□□ -0.71
SHMT2-205ENST00000553474 KALRNO60229 2985 aa10.61□□□□□ -0.71
SHMT2-205ENST00000553474 FAM208BQ5VWN6 2430 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 RAI1Q7Z5J4 1906 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-205ENST00000553474 NBASA2RRP1 2371 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 MT-CO2P00403 227 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 BMP5P22003 454 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 RPL29P47914 159 aaKnown RBP10.6□□□□□ -0.71
SHMT2-205ENST00000553474 NDUFA6P56556 154 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 DNLZQ5SXM8 178 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 LYG1Q8N1E2 194 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 ZNF383Q8NA42 475 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 MGST2Q99735 147 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 MS4A5Q9H3V2 200 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 NIT2Q9NQR4 276 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 RALYQ9UKM9 306 aaKnown RBP10.6□□□□□ -0.71
SHMT2-205ENST00000553474 PXMP4Q9Y6I8 212 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 C17orf100A8MU93 164 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 HMGB3O15347 200 aaKnown RBP10.6□□□□□ -0.71
SHMT2-205ENST00000553474 FAM3BP58499 235 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-205ENST00000553474 LCN2P80188 198 aa10.6□□□□□ -0.71
SHMT2-205ENST00000553474 PRCDQ00LT1 54 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms