RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 IGLV1-40P01703 118 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 MAS1LP35410 378 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 DEFA1P59665 94 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 DEFA3P59666 94 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 ERVK-16P61578 105 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 DCTN2Q13561 401 aaKnown RBP11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 TNXAQ16473 311 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 TRIM16LQ309B1 348 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 LYZL2Q7Z4W2 148 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 LYG2Q86SG7 212 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 FOXRED2Q8IWF2 684 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 SLC35G3Q8N808 338 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 RNF152Q8N8N0 203 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 OR52B4Q8NGK2 314 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 ENKURQ8TC29 256 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 CHPT1Q8WUD6 406 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 SRSF12Q8WXF0 261 aaKnown RBP11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 LSM10Q969L4 123 aaKnown RBP11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 NSG2Q9Y328 171 aa11.63□□□□□ -0.55
MTHFD1-204ENST00000553405 TRAV41A0A0B4J266 112 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 A0A0B4J2A0 478 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 CREBL2O60519 120 aaPredicted RBP11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 DUS4LO95620 317 aaKnown RBP11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 IGHG4P01861 327 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 VAMP1P23763 118 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 GNB1P62873 340 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 SRPXP78539 464 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 AKIRIN2Q53H80 203 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 ZNF329Q86UD4 541 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 GRPEL2Q8TAA5 225 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 MITD1Q8WV92 249 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 GPR146Q96CH1 333 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 CITED1Q99966 193 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 ZNF747Q9BV97 191 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 SHPKQ9UHJ6 478 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 FOXA2Q9Y261 457 aaPredicted RBP11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 WSB1Q9Y6I7 421 aa11.62□□□□□ -0.55
MTHFD1-204ENST00000553405 TEX50A0A1B0GTY4 177 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 IGLC7A0M8Q6 106 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 MSGN1A6NI15 193 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 PTTG1O95997 202 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 HLA-AP01891 365 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 IL5P05113 134 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 ANXA3P12429 323 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 HIST2H2BDQ6DRA6 164 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 H2BFWTQ7Z2G1 175 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 ZNF429Q86V71 674 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 ZNF695Q8IW36 515 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 FAM219AQ8IW50 185 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 LGI3Q8N145 548 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 LFNGQ8NES3 379 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 MYOZ3Q8TDC0 251 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 SEC22CQ9BRL7 303 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 NDUFA4L2Q9NRX3 87 aa11.61□□□□□ -0.55
MTHFD1-204ENST00000553405 DUXBA0A1W2PPF3 345 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 PSMB11A5LHX3 300 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 ADARB2-AS1A8MUL3 147 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 HAX1O00165 279 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 CNIH1O95406 144 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 CD28P10747 220 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 VDAC1P21796 283 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 PSMB8P28062 276 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 RPL27AP46776 148 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 AKR1C2P52895 323 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 RAB25P57735 213 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 CD83Q01151 205 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 KIAA0141Q14154 515 aaPredicted RBP11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 KLK9Q2XQG4 91 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 C4orf46Q504U0 113 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 OR5AU1Q8NGC0 362 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 CASTOR1Q8WTX7 329 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 QTRT1Q9BXR0 403 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 KLK9Q9UKQ9 250 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 PRNDQ9UKY0 176 aa11.6□□□□□ -0.55
MTHFD1-204ENST00000553405 PKD1L1Q8TDX9 2849 aa11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 HMX3A6NHT5 357 aa11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 INMT-MINDY4F8WBC2 141 aa11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 PITX3O75364 302 aa11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 RBMXL2O75526 392 aaKnown RBP11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 ATG12O94817 140 aa11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 BRI3O95415 125 aa11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 OPN1MWP04001 364 aa11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 OPN1MW2P0DN77 364 aa11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 OPN1MW3P0DN78 364 aa11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 ECSCRQ19T08 205 aa11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 PDLIM3Q53GG5 364 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 ARSJQ5FYB0 599 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 ZNF431Q8TF32 576 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 RRNAD1Q96FB5 475 aaKnown RBP11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 KLK15Q9H2R5 256 aa11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 COA4Q9NYJ1 87 aa11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 ZNF257Q9Y2Q1 563 aa11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 OR51B2Q9Y5P1 312 aa11.59□□□□□ -0.55
MTHFD1-204ENST00000553405 ST8SIA3O43173 380 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 SNAPC5O75971 98 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 CRYGCP07315 174 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 APELAP0DMC3 54 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 AREGP15514 252 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 HSPE1P61604 102 aaKnown RBP11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 WT1-ASQ06250 92 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms