RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 HRASLSQ9HDD0 168 aa12.11□□□□□ -0.47
CDK4-215ENST00000553237 KLK11Q9UBX7 282 aa12.11□□□□□ -0.47
CDK4-215ENST00000553237 FBXL7Q9UJT9 491 aa12.11□□□□□ -0.47
CDK4-215ENST00000553237 ZNF257Q9Y2Q1 563 aa12.11□□□□□ -0.47
CDK4-215ENST00000553237 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.1□□□□□ -0.47
CDK4-215ENST00000553237 CCDC160A6NGH7 325 aa12.1□□□□□ -0.47
CDK4-215ENST00000553237 IGHV3-23P01764 117 aa12.1□□□□□ -0.47
CDK4-215ENST00000553237 AREGP15514 252 aa12.1□□□□□ -0.47
CDK4-215ENST00000553237 MAS1LP35410 378 aa12.1□□□□□ -0.47
CDK4-215ENST00000553237 TSPAN5P62079 268 aa12.1□□□□□ -0.47
CDK4-215ENST00000553237 RPL8P62917 257 aaKnown RBP12.1□□□□□ -0.47
CDK4-215ENST00000553237 CATR1Q13166 79 aa12.1□□□□□ -0.47
CDK4-215ENST00000553237 OR4A47Q6IF82 309 aa12.1□□□□□ -0.47
CDK4-215ENST00000553237 C15orf40Q8WUR7 153 aa12.1□□□□□ -0.47
CDK4-215ENST00000553237 SLIRPQ9GZT3 109 aaKnown RBP12.1□□□□□ -0.47
CDK4-215ENST00000553237 C6orf62Q9GZU0 229 aaPredicted RBP12.1□□□□□ -0.47
CDK4-215ENST00000553237 SLC2A9Q9NRM0 540 aa12.1□□□□□ -0.47
CDK4-215ENST00000553237 NBEAL2Q6ZNJ1 2754 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 TRAV3A0A0B4J244 114 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 NPIPB5A8MRT5 1133 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 PPP5D1E7EU14 171 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 H0Y980 276 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 M0QYG6 137 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 NDUFB8O95169 186 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 REG1AP05451 166 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 ZNF735P0CB33 412 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 IGHV4-30-4P0DP06 118 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 RPA2P15927 270 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 HLA-GP17693 338 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 AADACL3Q5VUY0 350 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 FCAMRQ8WWV6 532 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 BORCS5Q969J3 196 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 DIRAS2Q96HU8 199 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 AIFM2Q9BRQ8 373 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 BET1LQ9NYM9 111 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 MTFP1Q9UDX5 166 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 S4R3C0 116 aa12.09□□□□□ -0.47
CDK4-215ENST00000553237 IZUMO1RA6ND01 250 aa12.08□□□□□ -0.48
CDK4-215ENST00000553237 CGB1A6NKQ9 187 aa12.08□□□□□ -0.48
CDK4-215ENST00000553237 RBFOX2O43251 390 aaKnown RBP eCLIP12.08□□□□□ -0.484e-10■■■■■ 35.5
CDK4-215ENST00000553237 HPRT1P00492 218 aa12.08□□□□□ -0.48
CDK4-215ENST00000553237 HLA-AP01891 365 aaKnown RBP12.08□□□□□ -0.48
CDK4-215ENST00000553237 PSMB6P28072 239 aa12.08□□□□□ -0.48
CDK4-215ENST00000553237 TAS2R31P59538 309 aa12.08□□□□□ -0.48
CDK4-215ENST00000553237 OR4A5Q8NH83 315 aa12.08□□□□□ -0.48
CDK4-215ENST00000553237 RCHY1Q96PM5 261 aa12.08□□□□□ -0.48
CDK4-215ENST00000553237 FANCD2OSQ96PS1 177 aa12.08□□□□□ -0.48
CDK4-215ENST00000553237 FXYD6Q9H0Q3 95 aa12.08□□□□□ -0.48
CDK4-215ENST00000553237 PEMTQ9UBM1 199 aa12.08□□□□□ -0.48
CDK4-215ENST00000553237 STAB2Q8WWQ8 2551 aa12.08□□□□□ -0.48
CDK4-215ENST00000553237 UPK2O00526 184 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 PGLYRP1O75594 196 aaPredicted RBP12.07□□□□□ -0.48
CDK4-215ENST00000553237 S1PR2O95136 353 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 OR2C1O95371 312 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 CD3DP04234 171 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 CRYGCP07315 174 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 DEFA4P12838 97 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 NQO2P16083 231 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 CTRB1P17538 263 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 CTRB2Q6GPI1 263 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 SGPP2Q8IWX5 399 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 CMTM1Q8IZ96 169 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 DMBX1Q8NFW5 382 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 MCFD2Q8NI22 146 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 RBM38Q9H0Z9 239 aaKnown RBP12.07□□□□□ -0.48
CDK4-215ENST00000553237 SIGLEC8Q9NYZ4 499 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 RSL24D1Q9UHA3 163 aaKnown RBP12.07□□□□□ -0.48
CDK4-215ENST00000553237 DMRT1Q9Y5R6 373 aa12.07□□□□□ -0.48
CDK4-215ENST00000553237 GABARAPH6UMI1 98 aa12.06□□□□□ -0.48
CDK4-215ENST00000553237 GPR31O00270 319 aa12.06□□□□□ -0.48
CDK4-215ENST00000553237 GGCTO75223 188 aaKnown RBP12.06□□□□□ -0.48
CDK4-215ENST00000553237 RLN1P04808 185 aa12.06□□□□□ -0.48
CDK4-215ENST00000553237 IFNA6P05013 189 aa12.06□□□□□ -0.48
CDK4-215ENST00000553237 OR2B8PP59922 312 aa12.06□□□□□ -0.48
CDK4-215ENST00000553237 MRPS10P82664 201 aaKnown RBP12.06□□□□□ -0.48
CDK4-215ENST00000553237 IL18Q14116 193 aa12.06□□□□□ -0.48
CDK4-215ENST00000553237 RNASE10Q5GAN6 216 aaKnown RBP12.06□□□□□ -0.48
CDK4-215ENST00000553237 LCN12Q6JVE5 192 aa12.06□□□□□ -0.48
CDK4-215ENST00000553237 CLEC19AQ6UXS0 136 aa12.06□□□□□ -0.48
CDK4-215ENST00000553237 ADAMTSL5Q6ZMM2 481 aa12.06□□□□□ -0.48
CDK4-215ENST00000553237 Q8N402 240 aa12.06□□□□□ -0.48
CDK4-215ENST00000553237 CD300LFQ8TDQ1 290 aa12.06□□□□□ -0.48
CDK4-215ENST00000553237 NXF2Q9GZY0 626 aaKnown RBP12.06□□□□□ -0.48
CDK4-215ENST00000553237 ZMAT4Q9H898 229 aa12.06□□□□□ -0.48
CDK4-215ENST00000553237 PLEKHA2Q9HB19 425 aa12.06□□□□□ -0.48
CDK4-215ENST00000553237 TMEM140Q9NV12 185 aa12.06□□□□□ -0.48
CDK4-215ENST00000553237 HUWE1Q7Z6Z7 4374 aaKnown RBP12.05□□□□□ -0.48
CDK4-215ENST00000553237 DHFRP00374 187 aa12.05□□□□□ -0.48
CDK4-215ENST00000553237 TBPP20226 339 aa12.05□□□□□ -0.48
CDK4-215ENST00000553237 EDN2P20800 178 aa12.05□□□□□ -0.48
CDK4-215ENST00000553237 TNFSF8P32971 234 aa12.05□□□□□ -0.48
CDK4-215ENST00000553237 MECP2P51608 486 aaKnown RBP12.05□□□□□ -0.48
CDK4-215ENST00000553237 POU2AF1Q16633 256 aa12.05□□□□□ -0.48
CDK4-215ENST00000553237 PHLDA2Q53GA4 152 aa12.05□□□□□ -0.48
CDK4-215ENST00000553237 LPCAT3Q6P1A2 487 aa12.05□□□□□ -0.48
CDK4-215ENST00000553237 TMEM229BQ8NBD8 167 aa12.05□□□□□ -0.48
CDK4-215ENST00000553237 CCDC140Q96MF4 163 aa12.05□□□□□ -0.48
CDK4-215ENST00000553237 COMMD5Q9GZQ3 224 aa12.05□□□□□ -0.48
CDK4-215ENST00000553237 C19orf73Q9NVV2 129 aa12.05□□□□□ -0.48
CDK4-215ENST00000553237 HIST1H1BP16401 226 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms