RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 LHX4Q969G2 390 aa7.39□□□□□ -1.23
RAB3IP-218ENST00000553099 NABP2Q9BQ15 211 aa7.39□□□□□ -1.23
RAB3IP-218ENST00000553099 SCRT1Q9BWW7 348 aa7.39□□□□□ -1.23
RAB3IP-218ENST00000553099 PARD6GQ9BYG4 376 aaPredicted RBP7.39□□□□□ -1.23
RAB3IP-218ENST00000553099 SLC25A22Q9H936 323 aa7.39□□□□□ -1.23
RAB3IP-218ENST00000553099 PLEKHA3Q9HB20 300 aa7.39□□□□□ -1.23
RAB3IP-218ENST00000553099 GNG13Q9P2W3 67 aa7.39□□□□□ -1.23
RAB3IP-218ENST00000553099 MIOXQ9UGB7 285 aa7.39□□□□□ -1.23
RAB3IP-218ENST00000553099 KPTNQ9Y664 436 aa7.39□□□□□ -1.23
RAB3IP-218ENST00000553099 A0A1W2PPH5 198 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 UPK2O00526 184 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 NDUFS7O75251 213 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 DEFA4P12838 97 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 NPY1RP25929 384 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 IL3RAP26951 378 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 ZNF726P1Q15940 193 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 POU2AF1Q16633 256 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 OR5AN1Q8NGI8 311 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 RXFP4Q8TDU9 374 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 AIFM2Q9BRQ8 373 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 MAP1LC3B2A6NCE7 125 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 KBTBD11O94819 623 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 LY86O95711 162 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 IGKV1D-33P01593 117 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 IGKV1-33P01594 117 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 CBLN2Q8IUK8 224 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 IQCF2Q8IXL9 164 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 LINC00311Q8N616 119 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 TMEM170AQ8WVE7 144 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 NEU4Q8WWR8 484 aaPredicted RBP7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 C20orf24Q9BUV8 137 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 MAP1LC3BQ9GZQ8 125 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 SLC35B3Q9H1N7 401 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 SLC39A9Q9NUM3 307 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 WASHC3Q9Y3C0 194 aa7.38□□□□□ -1.23
RAB3IP-218ENST00000553099 A0A087X0M5 115 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 A0A1B0GX30 115 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 C22orf46C9J442 243 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 C17orf112F2Z3M2 114 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 DNASE2O00115 360 aaPredicted RBP7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 CA2P00918 260 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 FBP1P09467 338 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 PDLIM3Q53GG5 364 aaPredicted RBP7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 PDPNQ86YL7 162 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 RPP25LQ8N5L8 163 aaKnown RBP7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 OR10G4Q8NGN3 311 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 OR10G9Q8NGN4 311 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 OR10G7Q8NGN6 311 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 ST6GALNAC6Q969X2 333 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 FAM122AQ96E09 287 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 CLEC7AQ9BXN2 247 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 COMMD5Q9GZQ3 224 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 SIRT7Q9NRC8 400 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 BET1LQ9NYM9 111 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 TIMM9Q9Y5J7 89 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 M0R036 132 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 LIPFP07098 398 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 AKR1C3P42330 323 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 RAB13P51153 203 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 PRRX1P54821 245 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 ARF6P62330 175 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 PRCDQ00LT1 54 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 VWC2Q2TAL6 325 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 HLA-DRB5Q30154 266 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 FAM71F2Q6NXP2 309 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 FAM122CQ6P4D5 195 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 DTX2Q86UW9 622 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 C8orf31Q8N9H6 132 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 OR10W1Q8NGF6 305 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 ZNF596Q8TC21 504 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 CHODLQ9H9P2 273 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 ZFYVE26Q68DK2 2539 aa7.37□□□□□ -1.23
RAB3IP-218ENST00000553099 TEX50A0A1B0GTY4 177 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 hCG_1809904A0A1W2PP81 198 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 A0A1W2PPE2 198 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 A0A1W2PR64 198 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 A0A1W2PRV1 198 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 SLC25A17O43808 307 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 SCAF4O95104 1147 aaKnown RBP7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 ATF4P18848 351 aaPredicted RBP7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 RPL8P62917 257 aaKnown RBP7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 TMEM177Q53S58 311 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 SOHLH1Q5JUK2 328 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 TREML4Q6UXN2 200 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 PNKDQ8N490 385 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 CLRN3Q8NCR9 226 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 CLDND2Q8NHS1 167 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 FKBP11Q9NYL4 201 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 WDR83OSQ9Y284 106 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 ZNF257Q9Y2Q1 563 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 USP24Q9UPU5 2620 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 GPR6P46095 362 aaPredicted RBP7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 ICAM4Q14773 271 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 C10orf55Q5SWW7 151 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 MOB3BQ86TA1 216 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 OR5B3Q8NH48 314 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 VSTM2AQ8TAG5 236 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 RPEQ96AT9 228 aa7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 SSBP3Q9BWW4 388 aaPredicted RBP7.36□□□□□ -1.23
RAB3IP-218ENST00000553099 PUS1Q9Y606 427 aaKnown RBP eCLIP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms