RNA–Protein interactions for RNA: ENST00000552008.5

LIMA1-209, Transcript of LIM domain and actin binding 1, humanhuman

TSL 5

Gene LIMA1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-209ENST00000552008 OR2J2O76002 312 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 NDUFB2O95178 105 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 PSMG1O95456 288 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 RAB36O95755 333 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 IGF2P01344 180 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 C1QAP02745 245 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 SOD3P08294 240 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 TFPTP0C1Z6 253 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 TSPAN19P0C672 248 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 PTHLHP12272 177 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 CCL4P13236 92 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF35P13682 527 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 F8A1P23610 371 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ELK4P28324 431 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 HSD11B1P28845 292 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 S100A2P29034 98 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 S100GP29377 79 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 S100A5P33763 92 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 EVI2BP34910 448 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 CDK9P50750 372 aaKnown RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF83P51522 516 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 KLF3P57682 345 aaPredicted RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 OR2B6P58173 313 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 PPP3R1P63098 170 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 HBA1P69905 142 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 BTG2P78543 158 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 MEF2CQ06413 473 aaPredicted RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 TSPAN31Q12999 210 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 GUSBP1Q15486 140 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 KCNJ8Q15842 424 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF141Q15928 474 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 TMEM241Q24JQ0 296 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 DEFB110Q30KQ9 67 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 C18orf21Q32NC0 220 aaPredicted RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF404Q494X3 552 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 SLC36A2Q495M3 483 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 TRMT12Q53H54 448 aaKnown RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 FBXO48Q5FWF7 155 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 AADACL4Q5VUY2 407 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 NXNL2Q5VZ03 156 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 LPCAT4Q643R3 524 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF660Q6AZW8 331 aaPredicted RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 HBMQ6B0K9 141 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 LCN8Q6JVE9 175 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 DHRS4L2Q6PKH6 230 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 SMARCD3Q6STE5 483 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 BRD3OSQ6XYD6 125 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 PLEKHG7Q6ZR37 379 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 PRNTQ86SH4 94 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 GALNT10Q86SR1 603 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 AMN1Q8IY45 258 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 KRTCAP2Q8N6L1 136 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ATP6V1C2Q8NEY4 427 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 OR11G2Q8NGC1 345 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 OR5AK3PQ8NH89 298 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 OR2V1Q8NHB1 315 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 MFSD8Q8NHS3 518 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 CASTOR1Q8WTX7 329 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 CT55Q8WUE5 264 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 TMEM239Q8WW34 195 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 CYGBQ8WWM9 190 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 PATE1Q8WXA2 126 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 RORBQ92753 470 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 RAB8BQ92930 207 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 TMBIM1Q969X1 311 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ZMYND19Q96E35 227 aaPredicted RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 TVP23CQ96ET8 276 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 CEP19Q96LK0 163 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 SPACA5Q96QH8 159 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 HBEGFQ99075 208 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 SDF2Q99470 211 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 TSC22D3Q99576 134 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 PITX2Q99697 317 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 MROQ9BYG7 248 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 SLC22A4Q9H015 551 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 RAB1BQ9H0U4 201 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 TCEAL2Q9H3H9 227 aaPredicted RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 RERGLQ9H628 205 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 NMNAT1Q9HAN9 279 aaPredicted RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 PLEKHA1Q9HB21 404 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 FAM60AQ9NP50 221 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ACER3Q9NUN7 267 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 TMEM38BQ9NVV0 291 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 MAT2BQ9NZL9 334 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 NAGKQ9UJ70 344 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF443Q9Y2A4 671 aaPredicted RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 RBMX2Q9Y388 322 aaKnown RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF706Q9Y5V0 76 aaPredicted RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ICOSQ9Y6W8 199 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 BAZ2BQ9UIF8 2168 aaKnown RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 PLXNA1Q9UIW2 1896 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 MYO5AQ9Y4I1 1855 aaKnown RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 A0A087WUJ7 227 aa1.17□□□□□ -2.22
LIMA1-209ENST00000552008 TMED7-TICAM2A0A0A6YYA0 188 aa1.17□□□□□ -2.22
LIMA1-209ENST00000552008 LOC100130705A0A1B0GUX0 176 aa1.17□□□□□ -2.22
LIMA1-209ENST00000552008 DAPL1A0PJW8 107 aa1.17□□□□□ -2.22
LIMA1-209ENST00000552008 FUOMA2VDF0 154 aa1.17□□□□□ -2.22
LIMA1-209ENST00000552008 RBFOX3A6NFN3 312 aa1.17□□□□□ -2.22
LIMA1-209ENST00000552008 CPSF4LA6NMK7 179 aaKnown RBP1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms