RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ELLP55199 621 aaPredicted RBP3.88□□□□□ -1.79
HOXB3-213ENST00000552000 UBE2KP61086 200 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 HLA-DRB3P79483 266 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 TMEM187Q14656 261 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 ATP6AP1Q15904 470 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 RTL8BQ17RB0 113 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 C1orf134Q5TEV5 83 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 LAMTOR1Q6IAA8 161 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 OR10K2Q6IF99 312 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 RPL22L1Q6P5R6 122 aaKnown RBP3.88□□□□□ -1.79
HOXB3-213ENST00000552000 ZNF767PQ75MW2 155 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 AMIGO2Q86SJ2 522 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 UBE2DNLQ8IWF7 75 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 CENPSQ8N2Z9 138 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 Q8NAQ8 132 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.88□□□□□ -1.79
HOXB3-213ENST00000552000 TRUB1Q8WWH5 349 aaKnown RBP3.88□□□□□ -1.79
HOXB3-213ENST00000552000 EEF1AKMT3Q96AZ1 226 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 FYTTD1Q96QD9 318 aaKnown RBP3.88□□□□□ -1.79
HOXB3-213ENST00000552000 ATP6V0BQ99437 205 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 NDUFAF3Q9BU61 184 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 SCRT1Q9BWW7 348 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 HRH4Q9H3N8 390 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 SDHAF2Q9NX18 166 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 RDH8Q9NYR8 311 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 CKLFQ9UBR5 152 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 UFC1Q9Y3C8 167 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 IGHV3OR16-8A0A075B7F1 116 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 DEFB131BA0A096LNP1 70 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 IGKV1-6A0A0C4DH72 117 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 TRBV5-5A0A0J9YX44 114 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 SNTNA6NMZ2 147 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 NPIPB5A8MRT5 1133 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 TEX22C9J3V5 150 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 ZNF207O43670 478 aaKnown RBP3.87□□□□□ -1.79
HOXB3-213ENST00000552000 IFNA10P01566 189 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 IL6RP08887 468 aaPredicted RBP3.87□□□□□ -1.79
HOXB3-213ENST00000552000 CD3GP09693 182 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 LIMS3P0CW19 117 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 LIMS4P0CW20 117 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 SAA1P0DJI8 122 aaPredicted RBP3.87□□□□□ -1.79
HOXB3-213ENST00000552000 RRASP10301 218 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 AREGP15514 252 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 HTR2CP28335 458 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 GPR183P32249 361 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 TFPI2P48307 235 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 ZIK1Q3SY52 487 aaPredicted RBP3.87□□□□□ -1.79
HOXB3-213ENST00000552000 OR2G6Q5TZ20 316 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 MEDAGQ5VYS4 303 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 PLET1Q6UQ28 207 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 Q6ZRM9 215 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 MMD2Q8IY49 270 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 OR52I1Q8NGK6 324 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 TMEM190Q8WZ59 177 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 GGHQ92820 318 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 NICN1Q9BSH3 213 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 OR2D2Q9H210 308 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 KCNK15Q9H427 330 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 MRPS18AQ9NVS2 196 aaKnown RBP3.87□□□□□ -1.79
HOXB3-213ENST00000552000 PLEKHJ1Q9NW61 149 aa3.87□□□□□ -1.79
HOXB3-213ENST00000552000 IGKV3-7A0A075B6H7 116 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 TRBV5-7A0A0A0MS05 114 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 TRBV6-6A0A0A6YYG2 114 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 TRBV7-1A0A0A6YYK4 115 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 A0A1B0GW64 132 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 A4D1N5 150 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 LINC00473A8K010 186 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 E7EUB6 86 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 BET1O15155 118 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 RGS10O43665 173 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 CREBL2O60519 120 aaPredicted RBP3.86□□□□□ -1.79
HOXB3-213ENST00000552000 LALBAP00709 142 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 IFNA21P01568 189 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 IFNA17P01571 189 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 REG1AP05451 166 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 INAFM2P0DMQ5 153 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 DEFA4P12838 97 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 CALB2P22676 271 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 PSMB6P28072 239 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 RPL27AP46776 148 aaKnown RBP3.86□□□□□ -1.79
HOXB3-213ENST00000552000 RPS11P62280 158 aaKnown RBP eCLIP3.86□□□□□ -1.79
HOXB3-213ENST00000552000 RPS27AP62979 156 aaKnown RBP3.86□□□□□ -1.79
HOXB3-213ENST00000552000 TPBGQ13641 420 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 CDK10Q15131 360 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 Q499Y3 187 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 CCDC58Q4VC31 144 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 HSP90B2PQ58FF3 399 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 SSX9Q7RTT3 188 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 ZFP41Q8N8Y5 198 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 OR6M1Q8NGM8 313 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 ZNF502Q8TBZ5 544 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 SMIM19Q96E16 107 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 C20orf24Q9BUV8 137 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 TMEM59Q9BXS4 323 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 ZNF436Q9C0F3 470 aaPredicted RBP3.86□□□□□ -1.79
HOXB3-213ENST00000552000 RIMS4Q9H426 269 aaPredicted RBP3.86□□□□□ -1.79
HOXB3-213ENST00000552000 Q9N2K0 584 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 DAZ1Q9NQZ3 744 aaKnown RBP3.86□□□□□ -1.79
HOXB3-213ENST00000552000 SLC2A9Q9NRM0 540 aa3.86□□□□□ -1.79
HOXB3-213ENST00000552000 AK3Q9UIJ7 227 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms