RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TYMSP04818 313 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 KRTAP1-4P0C5Y4 121 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 OR56A5P0C7T3 313 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 C1GALT1C1LP0DN25 315 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 IGHV1-8P0DP01 117 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 COX4I1P13073 169 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 MDKP21741 143 aaPredicted RBP3.47□□□□□ -1.85
CPSF6-206ENST00000550987 APLNRP35414 380 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 CRYBA4P53673 196 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 RAB2AP61019 212 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 MAXP61244 160 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 RBX1P62877 108 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 CRADDP78560 199 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 IFITM3Q01628 133 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 OR1Q1Q15612 314 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 TRAM1Q15629 374 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 TRIP13Q15645 432 aaPredicted RBP3.47□□□□□ -1.85
CPSF6-206ENST00000550987 DEFB116Q30KQ4 102 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 LIN52Q52LA3 116 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 MPV17L2Q567V2 206 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 OR10J3Q5JRS4 329 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 FAM27D1Q5T7N8 215 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 ZFAND6Q6FIF0 208 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 RPL13AP3Q6NVV1 102 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 Q6ZVH6 145 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 FAM19A5Q7Z5A7 132 aaPredicted RBP3.47□□□□□ -1.85
CPSF6-206ENST00000550987 S100A7AQ86SG5 101 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 CPNE9Q8IYJ1 553 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 LRRC25Q8N386 305 aaPredicted RBP3.47□□□□□ -1.85
CPSF6-206ENST00000550987 OR8G5Q8NG78 346 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 JOSD2Q8TAC2 188 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 EEF1AKMT1Q8WVE0 214 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 SKA2Q8WVK7 121 aaPredicted RBP3.47□□□□□ -1.85
CPSF6-206ENST00000550987 ADTRPQ96IZ2 230 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 VAT1Q99536 393 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 NDFIP1Q9BT67 221 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 CDCA4Q9BXL8 241 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 SLC25A39Q9BZJ4 359 aaPredicted RBP3.47□□□□□ -1.85
CPSF6-206ENST00000550987 CHRNA10Q9GZZ6 450 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 RPP21Q9H633 154 aaKnown RBP3.47□□□□□ -1.85
CPSF6-206ENST00000550987 EXOSC4Q9NPD3 245 aaKnown RBP3.47□□□□□ -1.85
CPSF6-206ENST00000550987 VPS29Q9UBQ0 182 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 RWDD2AQ9UIY3 292 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 ZNF835Q9Y2P0 537 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 LRP2P98164 4655 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 IGLV4-69A0A075B6H9 119 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.46□□□□□ -1.86
CPSF6-206ENST00000550987 TRAV8-4A0A0B4J246 113 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 TRAV17A0A0B4J275 112 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 A0A1W2PQ67 120 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 ZNF705GA8MUZ8 300 aaPredicted RBP3.46□□□□□ -1.86
CPSF6-206ENST00000550987 MANBAO00462 879 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 KPNA4O00629 521 aaPredicted RBP3.46□□□□□ -1.86
CPSF6-206ENST00000550987 PHYHO14832 338 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 TCAPO15273 167 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 CHST10O43529 356 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 PLIN3O60664 434 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 FOXH1O75593 365 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 SULT1C4O75897 302 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 CNIH1O95406 144 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 HAND1O96004 215 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 P01737 135 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 TFPTP0C1Z6 253 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 OR5AL1P0C617 328 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 OGNP20774 298 aaKnown RBP3.46□□□□□ -1.86
CPSF6-206ENST00000550987 S100PP25815 95 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 SDC4P31431 198 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 RPL5P46777 297 aaKnown RBP3.46□□□□□ -1.86
CPSF6-206ENST00000550987 SPINT3P49223 89 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 ERFP50548 548 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 TCTAP57738 103 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 KRTAP10-12P60413 245 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 PSPHP78330 225 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 DCDP81605 110 aaKnown RBP3.46□□□□□ -1.86
CPSF6-206ENST00000550987 CDK5Q00535 292 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 OR2F1Q13607 317 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 SLC25A35Q3KQZ1 300 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 TMEM97Q5BJF2 176 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 HENMT1Q5T8I9 393 aaKnown RBP3.46□□□□□ -1.86
CPSF6-206ENST00000550987 OLIG3Q7RTU3 272 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 Q8N7P7 452 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 OR52E4Q8NGH9 312 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 OR1J4Q8NGS1 313 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 C15orf40Q8WUR7 153 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 OR5P2Q8WZ92 322 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 ZNF285Q96NJ3 590 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 UGT2B28Q9BY64 529 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 ZNF442Q9H7R0 627 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 NMNAT1Q9HAN9 279 aaPredicted RBP3.46□□□□□ -1.86
CPSF6-206ENST00000550987 TMEM138Q9NPI0 162 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 ACOT13Q9NPJ3 140 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 FAM206AQ9NX38 181 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 RPUSD1Q9UJJ7 312 aaKnown RBP3.46□□□□□ -1.86
CPSF6-206ENST00000550987 SLC7A11Q9UPY5 501 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 KLF12Q9Y4X4 402 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 LSM5Q9Y4Y9 91 aaKnown RBP3.46□□□□□ -1.86
CPSF6-206ENST00000550987 MALRD1Q5VYJ5 2156 aa3.46□□□□□ -1.86
CPSF6-206ENST00000550987 IGHV2OR16-5A0A0B4J2B6 119 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 A0A0G2JMP0 313 aa3.45□□□□□ -1.86
CPSF6-206ENST00000550987 TINCRA0A1B0GVN0 87 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms