RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 RPLP1P05386 114 aaKnown RBP12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 APELAP0DMC3 54 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 MYOD1P15172 320 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 PSMB8P28062 276 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 DHODHQ02127 395 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 C2orf68Q2NKX9 166 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 H2BFWTQ7Z2G1 175 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 CADM3Q8N126 398 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 GLYATL2Q8WU03 294 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 FYTTD1Q96QD9 318 aaKnown RBP12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 SPIN2AQ99865 258 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 SPIN2BQ9BPZ2 258 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 COMMD5Q9GZQ3 224 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 TMEM222Q9H0R3 208 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 ZNF355PQ9NSJ1 428 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 ZFP57Q9NU63 452 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 NSG2Q9Y328 171 aa12.69□□□□□ -0.38
CHMP1A-209ENST00000550872 MGAM2Q2M2H8 2515 aa12.68□□□□□ -0.38
CHMP1A-209ENST00000550872 ADARB2-AS1A8MUL3 147 aa12.68□□□□□ -0.38
CHMP1A-209ENST00000550872 NDUFB6O95139 128 aa12.68□□□□□ -0.38
CHMP1A-209ENST00000550872 IGLV1-40P01703 118 aa12.68□□□□□ -0.38
CHMP1A-209ENST00000550872 OR9G9P0C7N8 305 aa12.68□□□□□ -0.38
CHMP1A-209ENST00000550872 AKR1C2P52895 323 aa12.68□□□□□ -0.38
CHMP1A-209ENST00000550872 RPL23AP62750 156 aaKnown RBP12.68□□□□□ -0.38
CHMP1A-209ENST00000550872 ASPHD1Q5U4P2 390 aa12.68□□□□□ -0.38
CHMP1A-209ENST00000550872 RNF152Q8N8N0 203 aa12.68□□□□□ -0.38
CHMP1A-209ENST00000550872 OR5M8Q8NGP6 311 aa12.68□□□□□ -0.38
CHMP1A-209ENST00000550872 TSC22D3Q99576 134 aa12.68□□□□□ -0.38
CHMP1A-209ENST00000550872 KLK15Q9H2R5 256 aa12.68□□□□□ -0.38
CHMP1A-209ENST00000550872 HMX3A6NHT5 357 aa12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 NUDT19A8MXV4 375 aa12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 E7EUB6 86 aa12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 CDS2O95674 445 aa12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 BTCP35070 178 aa12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 RAB9AP51151 201 aa12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 TMEM128Q5BJH2 165 aa12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 ZNF695Q8IW36 515 aa12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 CENPSQ8N2Z9 138 aa12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 RNASE11Q8TAA1 199 aaKnown RBP12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 CASTOR1Q8WTX7 329 aa12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 RRNAD1Q96FB5 475 aaKnown RBP12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 GALNT14Q96FL9 552 aa12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 MS4A10Q96PG2 267 aa12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 PRNDQ9UKY0 176 aa12.67□□□□□ -0.38
CHMP1A-209ENST00000550872 TEX50A0A1B0GTY4 177 aa12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 UPK1BO75841 260 aa12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 IGKV1-5P01602 117 aa12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 FGF2P09038 288 aa12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 ANXA3P12429 323 aa12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 OR2B8PP59922 312 aa12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 SUPT4H1P63272 117 aaKnown RBP12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 TMEM187Q14656 261 aa12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 C18orf65Q6ZTR6 163 aa12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 SELENOHQ8IZQ5 122 aaKnown RBP12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 OR4A16Q8NH70 328 aa12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 FAM110DQ8TAY7 271 aaPredicted RBP12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 RBPMSQ93062 196 aaKnown RBP12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 COA4Q9NYJ1 87 aa12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 FKBP11Q9NYL4 201 aa12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 FLVCR2Q9UPI3 526 aa12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 OR51B2Q9Y5P1 312 aa12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 MEGF8Q7Z7M0 2845 aa12.66□□□□□ -0.38
CHMP1A-209ENST00000550872 A0A1B0GW64 132 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 TEX22C9J3V5 150 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 RBMXL2O75526 392 aaKnown RBP12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 TSPAN15O95858 294 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 VAMP1P23763 118 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 CDX1P47902 265 aaPredicted RBP12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 IZUMO4Q1ZYL8 232 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 TMEM268Q5VZI3 342 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 SLC25A42Q86VD7 318 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 TTC9CQ8N5M4 171 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 KLHL30-AS1Q8NEE0 82 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 OR4F17Q8NGA8 305 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 OR1L8Q8NGR8 309 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 LHFPL5Q8TAF8 219 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 TMEM56Q96MV1 263 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 OR4F4Q96R69 305 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 HINT2Q9BX68 163 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 PRR13Q9NZ81 148 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 TMEM56-RWDD3S4R434 201 aa12.65□□□□□ -0.38
CHMP1A-209ENST00000550872 CGB1A6NKQ9 187 aa12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 C15orf61A6NNL5 157 aa12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 H3BUA1 57 aa12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 TRGV3P03979 118 aa12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 TRAPPC2P0DI81 140 aa12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 TRAPPC2BP0DI82 140 aa12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 TPPP2P59282 170 aa12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 KIAA0141Q14154 515 aaPredicted RBP12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 PRR31Q5SQ13 230 aa12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 MZT2BQ6NZ67 158 aa12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 ZNF491Q8N8L2 437 aa12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 MYOZ3Q8TDC0 251 aa12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 QTRT1Q9BXR0 403 aaKnown RBP12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 SLA2Q9H6Q3 261 aa12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 TMEM14BQ9NUH8 114 aa12.64□□□□□ -0.39
CHMP1A-209ENST00000550872 DBX1A6NMT0 343 aa12.63□□□□□ -0.39
CHMP1A-209ENST00000550872 SFT2D2O95562 160 aa12.63□□□□□ -0.39
CHMP1A-209ENST00000550872 P0C879 139 aa12.63□□□□□ -0.39
CHMP1A-209ENST00000550872 AREGP15514 252 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms