RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 HSD17B10Q99714 261 aaKnown RBP5.73□□□□□ -1.49
NEK3-201ENST00000550331 FAM110AQ9BQ89 295 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 ST6GALNAC5Q9BVH7 336 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 ATG5Q9H1Y0 275 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 VCX3BQ9H321 246 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 SLC2A9Q9NRM0 540 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 FBXL7Q9UJT9 491 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 KLK9Q9UKQ9 250 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 U3KQE9 123 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 HMX3A6NHT5 357 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 NOTOA8MTQ0 251 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 OR2C1O95371 312 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 IL6RP08887 468 aaPredicted RBP5.72□□□□□ -1.49
NEK3-201ENST00000550331 HIST1H1BP16401 226 aaKnown RBP5.72□□□□□ -1.49
NEK3-201ENST00000550331 PSMB6P28072 239 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 GNG2P59768 71 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 MSMO1Q15800 293 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 GUCA2BQ16661 112 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 CDNFQ49AH0 187 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 OR4A47Q6IF82 309 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 ZNF66Q6ZN08 573 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 VKORC1L1Q8N0U8 176 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 PUSL1Q8N0Z8 303 aaKnown RBP5.72□□□□□ -1.49
NEK3-201ENST00000550331 TCTEX1D2Q8WW35 142 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 EEF1AKMT3Q96AZ1 226 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 FANCD2OSQ96PS1 177 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 FYTTD1Q96QD9 318 aaKnown RBP5.72□□□□□ -1.49
NEK3-201ENST00000550331 WFDC10AQ9H1F0 79 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 SRD5A3Q9H8P0 318 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 ANXA10Q9UJ72 324 aa5.72□□□□□ -1.49
NEK3-201ENST00000550331 ELF5Q9UKW6 265 aaPredicted RBP5.72□□□□□ -1.49
NEK3-201ENST00000550331 TRBV7-1A0A0A6YYK4 115 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 IGKV1D-13A0A0B4J2D9 117 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 A0A1B0GW64 132 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 ZNF320A2RRD8 509 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 TMEM213A2RRL7 107 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 TMEM235A6NFC5 223 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 E7EUB6 86 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 J3QRK9 145 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 MRPS14O60783 128 aaKnown RBP5.71□□□□□ -1.5
NEK3-201ENST00000550331 NDUFB8O95169 186 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 HRASP01112 189 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 HLA-AP01891 365 aaKnown RBP5.71□□□□□ -1.5
NEK3-201ENST00000550331 IGKV1-13P0DP09 117 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 AREGP15514 252 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 CTRB1P17538 263 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 HLA-GP17693 338 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 EDN2P20800 178 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 FGF9P31371 208 aaPredicted RBP5.71□□□□□ -1.5
NEK3-201ENST00000550331 ARL3P36405 182 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 HSPA13P48723 471 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 BRWD1-AS2P59051 145 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 RPL8P62917 257 aaKnown RBP5.71□□□□□ -1.5
NEK3-201ENST00000550331 ANKRD55Q3KP44 614 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 FAM106AQ4KMX7 169 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 ZNF57Q68EA5 555 aaPredicted RBP5.71□□□□□ -1.5
NEK3-201ENST00000550331 CTRB2Q6GPI1 263 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 C22orf42Q6IC83 251 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 CLEC19AQ6UXS0 136 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 TMEM61Q8N0U2 210 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 MFSD4AQ8N468 514 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 OR52B4Q8NGK2 314 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 OR4A5Q8NH83 315 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 NUDCD2Q8WVJ2 157 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 CACNG8Q8WXS5 425 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 MARC2Q969Z3 335 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 CXorf58Q96LI9 332 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 AIFM2Q9BRQ8 373 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 GGTLC1Q9BX51 225 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 BET1LQ9NYM9 111 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 TAS2R8Q9NYW2 309 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 SPATA2Q9UM82 520 aa5.71□□□□□ -1.5
NEK3-201ENST00000550331 IGLV11-55A0A075B6I3 123 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 LOC102724200A0A096LPH7 203 aaPredicted RBP5.7□□□□□ -1.5
NEK3-201ENST00000550331 TRAV25A0A0B4J276 109 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 ANKRD65E5RJM6 399 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 RBFOX2O43251 390 aaKnown RBP eCLIP5.7□□□□□ -1.5
NEK3-201ENST00000550331 SSX5O60225 188 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 IGHV3-23P01764 117 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 FGF2P09038 288 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 C8orf88P0DMB2 117 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 DEFA4P12838 97 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 ELLP55199 621 aaPredicted RBP5.7□□□□□ -1.5
NEK3-201ENST00000550331 SCAND1P57086 179 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 GABARAPL2P60520 117 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 POU2AF1Q16633 256 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 TIMM50Q3ZCQ8 353 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 UBE2UQ5VVX9 321 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 IZUMO2Q6UXV1 221 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 C19orf35Q6ZS72 473 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 TPRA1Q86W33 373 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 UXS1Q8NBZ7 420 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 ZBTB34Q8NCN2 500 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 OR13F1Q8NGS4 319 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 LGALS14Q8TCE9 139 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 CNBD2Q96M20 576 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 SRSF8Q9BRL6 282 aaKnown RBP5.7□□□□□ -1.5
NEK3-201ENST00000550331 MLXQ9UH92 298 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 ABCA13Q86UQ4 5058 aa5.7□□□□□ -1.5
NEK3-201ENST00000550331 SMIM30A4D0T7 59 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms