RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 FAAHO00519 579 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 ZNF73O43830 326 aaPredicted RBP1.97□□□□□ -2.09
SNRPF-202ENST00000549580 OR2B3O76000 313 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 OR7C1O76099 320 aaPredicted RBP1.97□□□□□ -2.09
SNRPF-202ENST00000549580 CRYZL1O95825 349 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 S100A7P31151 101 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 Q6ZS49 121 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 KRT222Q8N1A0 295 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 OR8B12Q8NGG6 310 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 OR4X1Q8NH49 305 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 MCFD2Q8NI22 146 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 ZNF675Q8TD23 568 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 TTTY13Q9BZ97 58 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 WDR61Q9GZS3 305 aaKnown RBP1.97□□□□□ -2.09
SNRPF-202ENST00000549580 CCDC144AA2RUR9 1427 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 ATG2BQ96BY7 2078 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 DHX57Q6P158 1386 aaKnown RBP1.97□□□□□ -2.09
SNRPF-202ENST00000549580 ITGB4P16144 1822 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 TRAV26-2A0A0B4J265 109 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 FAM236DA0A1B0GTK5 79 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 SDHAF1A6NFY7 115 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 C11orf86A6NJI1 115 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 GNRH2O43555 120 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 PDE6DO43924 150 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 CST2P09228 141 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 FAM236CP0DP71 79 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 PPP1R2P41236 205 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 TAF1AQ15573 450 aaPredicted RBP1.96□□□□□ -2.1
SNRPF-202ENST00000549580 MIAQ16674 131 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 HACD4Q5VWC8 232 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 PPP1R2P3Q6NXS1 205 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 S100A7AQ86SG5 101 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 SLC35F6Q8N357 371 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 PXT1Q8NFP0 134 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 OR10X1Q8NGY0 326 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 MRPL30Q8TCC3 161 aaKnown RBP1.96□□□□□ -2.1
SNRPF-202ENST00000549580 KLF6Q99612 283 aaPredicted RBP1.96□□□□□ -2.1
SNRPF-202ENST00000549580 TMEM147Q9BVK8 224 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 EFCAB1Q9HAE3 211 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 IDI2-AS1Q9NZ38 188 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 PSORS1C2Q9UIG4 136 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 FAM215AQ9Y5M1 114 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 NUP155O75694 1391 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 PLXNB1O43157 2135 aa1.96□□□□□ -2.1
SNRPF-202ENST00000549580 PIK3C2GO75747 1445 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 hADV38S2A0JD32 116 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 ODF3BA8MYP8 253 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 ZNF878C9JN71 531 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 CREBL2O60519 120 aaPredicted RBP1.95□□□□□ -2.1
SNRPF-202ENST00000549580 ZNF728P0DKX0 622 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 CA5AP35218 305 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 RPS20P60866 119 aaKnown RBP1.95□□□□□ -2.1
SNRPF-202ENST00000549580 HBA1P69905 142 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 RUNX1Q01196 453 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 TMEM42Q69YG0 159 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 LHFPL1Q86WI0 220 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 OOSP2Q86WS3 158 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 OR51A2Q8NGJ7 313 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 CT55Q8WUE5 264 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 ERMAPQ96PL5 475 aaPredicted RBP1.95□□□□□ -2.1
SNRPF-202ENST00000549580 TSPAN32Q96QS1 320 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 NIPSNAP1Q9BPW8 284 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 C9orf16Q9BUW7 83 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 ZNF471Q9BX82 626 aaPredicted RBP1.95□□□□□ -2.1
SNRPF-202ENST00000549580 TUBA4BQ9H853 241 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 CISHQ9NSE2 258 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 FAM32AQ9Y421 112 aaKnown RBP1.95□□□□□ -2.1
SNRPF-202ENST00000549580 TMEM56-RWDD3S4R434 201 aa1.95□□□□□ -2.1
SNRPF-202ENST00000549580 TTC21AQ8NDW8 1320 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 REREQ9P2R6 1566 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 TRGV5A0A0B4J1U4 118 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 A0A0J9YW62 118 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 C2orf74A8MZ97 194 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 PIRO00625 290 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 LEPROTO15243 131 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 PRM2P04554 102 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 GZMHP20718 246 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 CCR2P41597 374 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 GABRA4P48169 554 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 VBP1P61758 197 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 CCL20P78556 96 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 FOXF1Q12946 379 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 TEX36Q5VZQ5 186 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 Q6ZS52 159 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 ZNF283Q8N7M2 679 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 ZNF676Q8N7Q3 588 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 GDPD1Q8N9F7 314 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 AP3S1Q92572 193 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 CCDC90BQ9GZT6 254 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 ENY2Q9NPA8 101 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 C14orf105Q9NVL8 296 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 FBXL12Q9NXK8 326 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 FUT9Q9Y231 359 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 CCL26Q9Y258 94 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 SAMHD1Q9Y3Z3 626 aaKnown RBP1.94□□□□□ -2.1
SNRPF-202ENST00000549580 SIPA1L1O43166 1804 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 LTBP2Q14767 1821 aa1.94□□□□□ -2.1
SNRPF-202ENST00000549580 PCF11O94913 1555 aaKnown RBP1.93□□□□□ -2.1
SNRPF-202ENST00000549580 TRPM6Q9BX84 2022 aa1.93□□□□□ -2.1
SNRPF-202ENST00000549580 SLIT2O94813 1529 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 332.8 ms