RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 HMGN2P46Q86SG4 172 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 ZNF565Q8N9K5 539 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 OR10X1Q8NGY0 326 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 OR2AE1Q8NHA4 323 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 OR10J5Q8NHC4 309 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 RPUSD4Q96CM3 377 aaKnown RBP3.85□□□□□ -1.79
SCAF11-212ENST00000549162 DAZAP1Q96EP5 407 aaKnown RBP3.85□□□□□ -1.79
SCAF11-212ENST00000549162 PAPOLGQ9BWT3 736 aaKnown RBP3.85□□□□□ -1.79
SCAF11-212ENST00000549162 CNFNQ9BYD5 112 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 SELENOIQ9C0D9 397 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 VSIRQ9H7M9 311 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 PRELID1Q9Y255 219 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 A0A0U1RRA0 63 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 NPIPB6E9PJ23 425 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 SOCS3O14543 225 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 KCNAB3O43448 404 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 MPC2O95563 127 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 SRD5A1P18405 259 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 GLRA1P23415 457 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 S100A11P31949 105 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 HTR2BP41595 481 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 SULT1A1P50225 295 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 NKX2-5P52952 324 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-212ENST00000549162 RPL32P62910 135 aaKnown RBP3.85□□□□□ -1.79
SCAF11-212ENST00000549162 NHLH2Q02577 135 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 SPRNQ5BIV9 151 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 ASPHD1Q5U4P2 390 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 OR2T2Q6IF00 324 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 FAM231DQ6ZW35 169 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 SCARB1Q8WTV0 552 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 PYGO2Q9BRQ0 406 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 ATG101Q9BSB4 218 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 SLC25A31Q9H0C2 315 aa3.85□□□□□ -1.79
SCAF11-212ENST00000549162 IGKV1D-13A0A0B4J2D9 117 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 C15orf62A8K5M9 175 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 NDUFB3O43676 98 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 JTBO76095 146 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 IGKV1-13P0DP09 117 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 S100GP29377 79 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 RPL8P62917 257 aaKnown RBP3.84□□□□□ -1.79
SCAF11-212ENST00000549162 GUK1Q16774 197 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 MMD2Q8IY49 270 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 GNPNAT1Q96EK6 184 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-212ENST00000549162 TET2Q6N021 2002 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-212ENST00000549162 TRAV18A0A075B6X5 111 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 TRBV7-1A0A0A6YYK4 115 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 C9JCJ5 164 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 F5H5P2 479 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 VENTXO95231 258 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 GNB3P16520 340 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 GPR12P47775 334 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 SELENOTP62341 195 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 TNFRSF9Q07011 255 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 PPP1R1AQ13522 171 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 SGPP2Q8IWX5 399 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 PRSS58Q8IYP2 241 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 Q8N9W7 124 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 CLDND2Q8NHS1 167 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 GRAMD2BQ96HH9 432 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 TMEM231Q9H6L2 316 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 KLK11Q9UBX7 282 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 TCF19Q9Y242 345 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 MYO9BQ13459 2157 aa3.84□□□□□ -1.79
SCAF11-212ENST00000549162 M0R1B8 84 aa3.84□□□□□ -1.8
SCAF11-212ENST00000549162 NBR2O15453 112 aa3.84□□□□□ -1.8
SCAF11-212ENST00000549162 CRTAPO75718 401 aaPredicted RBP3.84□□□□□ -1.8
SCAF11-212ENST00000549162 RNASE2P10153 161 aaKnown RBP3.84□□□□□ -1.8
SCAF11-212ENST00000549162 IER3P46695 156 aa3.84□□□□□ -1.8
SCAF11-212ENST00000549162 HSPE1P61604 102 aaKnown RBP3.84□□□□□ -1.8
SCAF11-212ENST00000549162 IL18Q14116 193 aa3.84□□□□□ -1.8
SCAF11-212ENST00000549162 TMEM144Q7Z5S9 345 aa3.84□□□□□ -1.8
SCAF11-212ENST00000549162 GPHB5Q86YW7 130 aa3.84□□□□□ -1.8
SCAF11-212ENST00000549162 ZNF525Q8N782 197 aa3.84□□□□□ -1.8
SCAF11-212ENST00000549162 ZNF488Q96MN9 340 aa3.84□□□□□ -1.8
SCAF11-212ENST00000549162 TAF9BQ9HBM6 251 aa3.84□□□□□ -1.8
SCAF11-212ENST00000549162 MMP26Q9NRE1 261 aa3.84□□□□□ -1.8
SCAF11-212ENST00000549162 PLEKHJ1Q9NW61 149 aa3.84□□□□□ -1.8
SCAF11-212ENST00000549162 RDH8Q9NYR8 311 aa3.84□□□□□ -1.8
SCAF11-212ENST00000549162 IGKV1D-37A0A075B6S9 117 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 A0A1W2PPQ1 181 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 DVL1O14640 695 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 GGCTO75223 188 aaKnown RBP3.83□□□□□ -1.8
SCAF11-212ENST00000549162 MSMBP08118 114 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 M6PRP20645 277 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 VEGFCP49767 419 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 ERVS71-1P61550 626 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 KLF17Q5JT82 389 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-212ENST00000549162 SIGLEC15Q6ZMC9 328 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 PQLC2Q6ZP29 291 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 TP53RKQ96S44 253 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 ATP5SQ99766 215 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 DNAJC4Q9NNZ3 241 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-212ENST00000549162 PPP1R3CQ9UQK1 317 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 C14orf166Q9Y224 244 aaKnown RBP3.83□□□□□ -1.8
SCAF11-212ENST00000549162 F11RQ9Y624 299 aaKnown RBP3.83□□□□□ -1.8
SCAF11-212ENST00000549162 SAA2-SAA4A0A096LPE2 208 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 FAM25AB3EWG3 89 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 FAM25CB3EWG5 89 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 FAM25GB3EWG6 89 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms