RNA–Protein interactions for RNA: ENST00000548814.1

GPD1-205, Transcript of glycerol-3-phosphate dehydrogenase 1, human

TSL 2 BASIC

Gene GPD1, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPD1-205	ENST00000548814	TAF15	Q92804	592 aa	Known RBP eCLIP	11.34	□□□□□ -0.59
GPD1-205	ENST00000548814	LSM10	Q969L4	123 aa	Known RBP	11.34	□□□□□ -0.59
GPD1-205	ENST00000548814	OR10C1	Q96KK4	312 aa		11.34	□□□□□ -0.59
GPD1-205	ENST00000548814	ESM1	Q9NQ30	184 aa		11.34	□□□□□ -0.59
GPD1-205	ENST00000548814	TMEM140	Q9NV12	185 aa		11.34	□□□□□ -0.59
GPD1-205	ENST00000548814	MMP24	Q9Y5R2	645 aa		11.34	□□□□□ -0.59
GPD1-205	ENST00000548814	TET2	Q6N021	2002 aa	Predicted RBP	11.34	□□□□□ -0.59
GPD1-205	ENST00000548814	SLC25A17	O43808	307 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	OR9G9	P0C7N8	305 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	SAA1	P0DJI8	122 aa	Predicted RBP	11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	IER3	P46695	156 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	LGALS7	P47929	136 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	FLI1	Q01543	452 aa	Predicted RBP	11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	EXOSC2	Q13868	293 aa	Known RBP	11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	MMD	Q15546	238 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	OR4A47	Q6IF82	309 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	RBMS3	Q6XE24	437 aa	Known RBP	11.33	□□□□□ -0.6
GPD1-205	ENST00000548814		Q6ZRM9	215 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	EIF4E3	Q8N5X7	224 aa	Known RBP	11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	WDR89	Q96FK6	387 aa	Predicted RBP	11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	RNF5	Q99942	180 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	PDCD10	Q9BUL8	212 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	CHIA	Q9BZP6	476 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	NSG2	Q9Y328	171 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	TRAV3	A0A0B4J244	114 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814		P0C879	139 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	PSG5	Q15238	335 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	POU2AF1	Q16633	256 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	IAH1	Q2TAA2	248 aa	Predicted RBP	11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	VMA21	Q3ZAQ7	101 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	FAM219A	Q8IW50	185 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814		Q8N6K4	173 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	TSNAX	Q99598	290 aa	Known RBP	11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	GSKIP	Q9P0R6	139 aa		11.33	□□□□□ -0.6
GPD1-205	ENST00000548814	MFSD2B	A6NFX1	497 aa		11.32	□□□□□ -0.6
GPD1-205	ENST00000548814	DNAJC9-AS1	A6NH13	148 aa		11.32	□□□□□ -0.6
GPD1-205	ENST00000548814	NCBP2L	A6PVI3	153 aa	Known RBP	11.32	□□□□□ -0.6
GPD1-205	ENST00000548814	NBR2	O15453	112 aa		11.32	□□□□□ -0.6
GPD1-205	ENST00000548814	NUP62	P37198	522 aa	Predicted RBP	11.32	□□□□□ -0.6
GPD1-205	ENST00000548814	UBE2K	P61086	200 aa		11.32	□□□□□ -0.6
GPD1-205	ENST00000548814	FGL1	Q08830	312 aa		11.32	□□□□□ -0.6
GPD1-205	ENST00000548814	PUSL1	Q8N0Z8	303 aa	Known RBP	11.32	□□□□□ -0.6
GPD1-205	ENST00000548814	FBXL15	Q9H469	300 aa		11.32	□□□□□ -0.6
GPD1-205	ENST00000548814	TPSG1	Q9NRR2	321 aa		11.32	□□□□□ -0.6
GPD1-205	ENST00000548814	METTL1	Q9UBP6	276 aa	Known RBP	11.32	□□□□□ -0.6
GPD1-205	ENST00000548814	CACNG5	Q9UF02	275 aa		11.32	□□□□□ -0.6
GPD1-205	ENST00000548814	TCF19	Q9Y242	345 aa		11.32	□□□□□ -0.6
GPD1-205	ENST00000548814	SH2D7	A6NKC9	451 aa	Predicted RBP	11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	KBTBD11	O94819	623 aa		11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	NXPH3	O95157	252 aa		11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	OR2B8P	P59922	312 aa		11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	SMCO1	Q147U7	214 aa		11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	PLGLA	Q15195	96 aa		11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	NPB	Q8NG41	125 aa		11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	VSTM2A	Q8TAG5	236 aa		11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	ZNF418	Q8TF45	676 aa	Predicted RBP	11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	C2orf50	Q96LR7	162 aa		11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	CLCC1	Q96S66	551 aa		11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	SPIN2A	Q99865	258 aa		11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	SPIN2B	Q9BPZ2	258 aa		11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	BET1L	Q9NYM9	111 aa		11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	KIAA1456	Q9P272	454 aa		11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	PLXNB1	O43157	2135 aa		11.31	□□□□□ -0.6
GPD1-205	ENST00000548814	TNC	P24821	2201 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814		A0A1B0GU03	582 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	UPK2	O00526	184 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	RRH	O14718	337 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	TSPAN4	O14817	238 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	RBMXL2	O75526	392 aa	Known RBP	11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	SCO1	O75880	301 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	NDUFA3	O95167	84 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	CRYGB	P07316	175 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	IL6R	P08887	468 aa	Predicted RBP	11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	RELB	Q01201	579 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	TUSC1	Q2TAM9	212 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	TEX45	Q8NA69	505 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	OR4A16	Q8NH70	328 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	OR1S1	Q8NH92	325 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	SLC25A33	Q9BSK2	321 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	PRDM13	Q9H4Q3	707 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814	SIGLEC9	Q9Y336	463 aa		11.3	□□□□□ -0.6
GPD1-205	ENST00000548814		A6NDX4	124 aa		11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	CHST1	O43916	411 aa		11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	SPDEF	O95238	335 aa		11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	SCGB1D2	O95969	90 aa		11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	MYOD1	P15172	320 aa		11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	CYCS	P99999	105 aa	Known RBP	11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	PJVK	Q0ZLH3	352 aa		11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	SCGB2A2	Q13296	93 aa		11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	TMEM167A	Q8TBQ9	72 aa		11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	SSMEM1	Q8WWF3	244 aa		11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	RBM14	Q96PK6	669 aa	Known RBP	11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	QTRT1	Q9BXR0	403 aa	Known RBP	11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	C1RL	Q9NZP8	487 aa		11.29	□□□□□ -0.6
GPD1-205	ENST00000548814	BTBD17	A6NE02	478 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms