RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 IGHV3-72A0A0B4J1Y9 119 aa13.89□□□□□ -0.19
HDAC7-227ENST00000548080 A0A1W2PPI3 338 aa13.89□□□□□ -0.19
HDAC7-227ENST00000548080 SRRM4A7MD48 611 aaKnown RBP13.89□□□□□ -0.19
HDAC7-227ENST00000548080 FAM90A26D6RGX4 464 aa13.89□□□□□ -0.19
HDAC7-227ENST00000548080 E5RGE8 158 aa13.89□□□□□ -0.19
HDAC7-227ENST00000548080 L7N2F9 121 aa13.89□□□□□ -0.19
HDAC7-227ENST00000548080 OR9G9P0C7N8 305 aa13.89□□□□□ -0.19
HDAC7-227ENST00000548080 RPS16P62249 146 aaKnown RBP13.89□□□□□ -0.19
HDAC7-227ENST00000548080 POLR2GP62487 172 aaKnown RBP eCLIP13.89□□□□□ -0.19
HDAC7-227ENST00000548080 OR4A47Q6IF82 309 aa13.89□□□□□ -0.19
HDAC7-227ENST00000548080 INO80EQ8NBZ0 244 aaPredicted RBP13.89□□□□□ -0.19
HDAC7-227ENST00000548080 MAGT1Q9H0U3 335 aa13.89□□□□□ -0.19
HDAC7-227ENST00000548080 NSG2Q9Y328 171 aa13.89□□□□□ -0.19
HDAC7-227ENST00000548080 NXPH3O95157 252 aa13.88□□□□□ -0.19
HDAC7-227ENST00000548080 PVALBP20472 110 aaPredicted RBP13.88□□□□□ -0.19
HDAC7-227ENST00000548080 NUP62P37198 522 aaPredicted RBP13.88□□□□□ -0.19
HDAC7-227ENST00000548080 LGALS7P47929 136 aa13.88□□□□□ -0.19
HDAC7-227ENST00000548080 CCDC144NLQ6NUI1 221 aa13.88□□□□□ -0.19
HDAC7-227ENST00000548080 ACOT7LQ6ZUV0 252 aa13.88□□□□□ -0.19
HDAC7-227ENST00000548080 HARBI1Q96MB7 349 aa13.88□□□□□ -0.19
HDAC7-227ENST00000548080 PLSCR3Q9NRY6 295 aa13.88□□□□□ -0.19
HDAC7-227ENST00000548080 STAB1Q9NY15 2570 aa13.88□□□□□ -0.19
HDAC7-227ENST00000548080 WRBO00258 174 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 CHST1O43916 411 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 RBMXL2O75526 392 aaKnown RBP13.87□□□□□ -0.19
HDAC7-227ENST00000548080 OR2F2O95006 317 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 IL6RP08887 468 aaPredicted RBP13.87□□□□□ -0.19
HDAC7-227ENST00000548080 CD1BP29016 333 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 RELBQ01201 579 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 OR2F1Q13607 317 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 OR4A16Q8NH70 328 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 OR5R1Q8NH85 324 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 C11orf1Q9H5F2 150 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 TENM1Q9UKZ4 2725 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 TRAV3A0A0B4J244 114 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 TIMM23O14925 209 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 SSSCA1O60232 199 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 MED6O75586 246 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 C4BPBP20851 252 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 HABP2Q14520 560 aaPredicted RBP13.87□□□□□ -0.19
HDAC7-227ENST00000548080 AARDQ4LEZ3 155 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 PUSL1Q8N0Z8 303 aaKnown RBP13.87□□□□□ -0.19
HDAC7-227ENST00000548080 C1RLQ9NZP8 487 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 HSPB7Q9UBY9 170 aa13.87□□□□□ -0.19
HDAC7-227ENST00000548080 A0A0D9SG52 128 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 RNF222A6NCQ9 220 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 UPK2O00526 184 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 KCNAB3O43448 404 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 SYNGR2O43760 224 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 IGLV2-23P01705 113 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 CRYBA1P05813 215 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 SAA1P0DJI8 122 aaPredicted RBP13.86□□□□□ -0.19
HDAC7-227ENST00000548080 P2RY1P47900 373 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 AP2S1P53680 142 aaPredicted RBP13.86□□□□□ -0.19
HDAC7-227ENST00000548080 VAMP2P63027 116 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 TNFRSF9Q07011 255 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 ZNF345Q14585 488 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 TMUB2Q71RG4 321 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 KCNRGQ8N5I3 272 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 CFHR4Q92496 578 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 RNF5Q99942 180 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 QTRT1Q9BXR0 403 aaKnown RBP13.86□□□□□ -0.19
HDAC7-227ENST00000548080 BET1LQ9NYM9 111 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 CACFD1Q9UGQ2 172 aa13.86□□□□□ -0.19
HDAC7-227ENST00000548080 A6NDX4 124 aa13.85□□□□□ -0.19
HDAC7-227ENST00000548080 HKR1P10072 659 aa13.85□□□□□ -0.19
HDAC7-227ENST00000548080 OR2B8PP59922 312 aa13.85□□□□□ -0.19
HDAC7-227ENST00000548080 UBE2KP61086 200 aa13.85□□□□□ -0.19
HDAC7-227ENST00000548080 AANATQ16613 207 aa13.85□□□□□ -0.19
HDAC7-227ENST00000548080 VMA21Q3ZAQ7 101 aa13.85□□□□□ -0.19
HDAC7-227ENST00000548080 OR52E5Q8NH55 327 aa13.85□□□□□ -0.19
HDAC7-227ENST00000548080 OR4A5Q8NH83 315 aa13.85□□□□□ -0.19
HDAC7-227ENST00000548080 VSTM2AQ8TAG5 236 aa13.85□□□□□ -0.19
HDAC7-227ENST00000548080 RITA1Q96K30 269 aa13.85□□□□□ -0.19
HDAC7-227ENST00000548080 AQP10Q96PS8 301 aa13.85□□□□□ -0.19
HDAC7-227ENST00000548080 RAB40CQ96S21 281 aa13.85□□□□□ -0.19
HDAC7-227ENST00000548080 TSNAXQ99598 290 aaKnown RBP13.85□□□□□ -0.19
HDAC7-227ENST00000548080 RBKSQ9H477 322 aa13.85□□□□□ -0.19
HDAC7-227ENST00000548080 TCF19Q9Y242 345 aa13.85□□□□□ -0.19
HDAC7-227ENST00000548080 TMEM89A2RUT3 159 aa13.84□□□□□ -0.19
HDAC7-227ENST00000548080 C15orf61A6NNL5 157 aa13.84□□□□□ -0.19
HDAC7-227ENST00000548080 MDKP21741 143 aaPredicted RBP13.84□□□□□ -0.19
HDAC7-227ENST00000548080 RPL12P30050 165 aaKnown RBP13.84□□□□□ -0.19
HDAC7-227ENST00000548080 S100A11P31949 105 aa13.84□□□□□ -0.19
HDAC7-227ENST00000548080 OPCMLQ14982 345 aa13.84□□□□□ -0.19
HDAC7-227ENST00000548080 ZNF429Q86V71 674 aa13.84□□□□□ -0.19
HDAC7-227ENST00000548080 ARL6Q9H0F7 186 aa13.84□□□□□ -0.19
HDAC7-227ENST00000548080 PRNDQ9UKY0 176 aa13.84□□□□□ -0.19
HDAC7-227ENST00000548080 FOXA2Q9Y261 457 aaPredicted RBP13.84□□□□□ -0.19
HDAC7-227ENST00000548080 MSGN1A6NI15 193 aa13.83□□□□□ -0.2
HDAC7-227ENST00000548080 KBTBD11O94819 623 aa13.83□□□□□ -0.2
HDAC7-227ENST00000548080 DYNLT3P51808 116 aa13.83□□□□□ -0.2
HDAC7-227ENST00000548080 PAX9P55771 341 aa13.83□□□□□ -0.2
HDAC7-227ENST00000548080 SPCS3P61009 180 aa13.83□□□□□ -0.2
HDAC7-227ENST00000548080 TMEM167AQ8TBQ9 72 aa13.83□□□□□ -0.2
HDAC7-227ENST00000548080 SMIM8Q96KF7 97 aa13.83□□□□□ -0.2
HDAC7-227ENST00000548080 ZC4H2Q9NQZ6 224 aa13.83□□□□□ -0.2
HDAC7-227ENST00000548080 TMEM14BQ9NUH8 114 aa13.83□□□□□ -0.2
HDAC7-227ENST00000548080 FKBP11Q9NYL4 201 aa13.83□□□□□ -0.2
HDAC7-227ENST00000548080 TMEM50AO95807 157 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms