RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CRLF1O75462 422 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 IFNA17P01571 189 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 HLA-DRB1P01911 266 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 RLN2P04090 185 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 OR2B8PP59922 312 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 SPCS3P61009 180 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 HSPE1P61604 102 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 ID3Q02535 119 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 IL15RAQ13261 267 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 C5orf56Q8N8D9 126 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 OR1L8Q8NGR8 309 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 RBMXL1Q96E39 390 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 CLCC1Q96S66 551 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 HSPB7Q9UBY9 170 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 NSG2Q9Y328 171 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 OR51B2Q9Y5P1 312 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 TRAV3A0A0B4J244 114 aa12.6□□□□□ -0.39
TRAFD1-203ENST00000547063 CLDN34H7C241 214 aa12.6□□□□□ -0.39
TRAFD1-203ENST00000547063 CNIH1O95406 144 aa12.6□□□□□ -0.39
TRAFD1-203ENST00000547063 SCGB1D2O95969 90 aa12.6□□□□□ -0.39
TRAFD1-203ENST00000547063 PVALBP20472 110 aaPredicted RBP12.6□□□□□ -0.39
TRAFD1-203ENST00000547063 PSMB6P28072 239 aa12.6□□□□□ -0.39
TRAFD1-203ENST00000547063 TNFRSF9Q07011 255 aa12.6□□□□□ -0.39
TRAFD1-203ENST00000547063 TNXAQ16473 311 aa12.6□□□□□ -0.39
TRAFD1-203ENST00000547063 PDLIM3Q53GG5 364 aaPredicted RBP12.6□□□□□ -0.39
TRAFD1-203ENST00000547063 ZNF562Q6V9R5 426 aa12.6□□□□□ -0.39
TRAFD1-203ENST00000547063 PPP1R1CQ8WVI7 109 aa12.6□□□□□ -0.39
TRAFD1-203ENST00000547063 QTRT1Q9BXR0 403 aaKnown RBP12.6□□□□□ -0.39
TRAFD1-203ENST00000547063 ENY2Q9NPA8 101 aa12.6□□□□□ -0.39
TRAFD1-203ENST00000547063 TPSG1Q9NRR2 321 aa12.6□□□□□ -0.39
TRAFD1-203ENST00000547063 SYNGR2O43760 224 aa12.59□□□□□ -0.39
TRAFD1-203ENST00000547063 CA2P00918 260 aa12.59□□□□□ -0.39
TRAFD1-203ENST00000547063 RPL27AP46776 148 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-203ENST00000547063 COMPP49747 757 aaPredicted RBP12.59□□□□□ -0.39
TRAFD1-203ENST00000547063 FBLN7Q53RD9 439 aa12.59□□□□□ -0.39
TRAFD1-203ENST00000547063 HSD17B13Q7Z5P4 300 aaPredicted RBP12.59□□□□□ -0.39
TRAFD1-203ENST00000547063 TCTE3Q8IZS6 198 aa12.59□□□□□ -0.39
TRAFD1-203ENST00000547063 OR2T35Q8NGX2 323 aa12.59□□□□□ -0.39
TRAFD1-203ENST00000547063 ST6GAL2Q96JF0 529 aa12.59□□□□□ -0.39
TRAFD1-203ENST00000547063 CIB3Q96Q77 187 aaPredicted RBP12.59□□□□□ -0.39
TRAFD1-203ENST00000547063 RANGRFQ9HD47 186 aaPredicted RBP12.59□□□□□ -0.39
TRAFD1-203ENST00000547063 AKAP9Q99996 3911 aa12.58□□□□□ -0.39
TRAFD1-203ENST00000547063 TEX50A0A1B0GTY4 177 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 A0A1W2PN81 502 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 CEBPZOSA8MTT3 80 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 MBPP02686 304 aaPredicted RBP12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 CHRNA7P36544 502 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 S100A10P60903 97 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 RPL15P61313 204 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 GNB1P62873 340 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 PRCDQ00LT1 54 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 PJVKQ0ZLH3 352 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 RAB32Q13637 225 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 FXYD3Q14802 87 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 CXorf66Q5JRM2 361 aaPredicted RBP12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 THAP6Q8TBB0 222 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 RAB40CQ96S21 281 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 SRSF8Q9BRL6 282 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 NPFFR1Q9GZQ6 430 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 HIPK2Q9H2X6 1198 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 PLEKHA3Q9HB20 300 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 TNCP24821 2201 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 CELSR1Q9NYQ6 3014 aa12.58□□□□□ -0.4
TRAFD1-203ENST00000547063 DNAJC9-AS1A6NH13 148 aa12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 FCN1O00602 326 aa12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 KCNAB3O43448 404 aa12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 CHST1O43916 411 aa12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 GPR137BO60478 399 aa12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 MPC2O95563 127 aa12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 HOXA1P49639 335 aaPredicted RBP12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 HILS1P60008 231 aa12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 CX3CL1P78423 397 aa12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 MRGPRG-AS1Q2M3A8 158 aa12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 LRRC37A5PQ49AS3 106 aa12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 SRSF12Q8WXF0 261 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 NEURL2Q9BR09 285 aa12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 HINT2Q9BX68 163 aa12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 NDUFA4L2Q9NRX3 87 aa12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 TNFRSF19Q9NS68 423 aa12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 LSM5Q9Y4Y9 91 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-203ENST00000547063 INS-IGF2F8WCM5 200 aa12.56□□□□□ -0.4
TRAFD1-203ENST00000547063 K7EPK0 472 aa12.56□□□□□ -0.4
TRAFD1-203ENST00000547063 L7N2F9 121 aa12.56□□□□□ -0.4
TRAFD1-203ENST00000547063 DEDDO75618 318 aa12.56□□□□□ -0.4
TRAFD1-203ENST00000547063 TAS2R30P59541 319 aa12.56□□□□□ -0.4
TRAFD1-203ENST00000547063 VAMP2P63027 116 aa12.56□□□□□ -0.4
TRAFD1-203ENST00000547063 RPP30P78346 268 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-203ENST00000547063 DTD1Q8TEA8 209 aa12.56□□□□□ -0.4
TRAFD1-203ENST00000547063 ARPC1AQ92747 370 aa12.56□□□□□ -0.4
TRAFD1-203ENST00000547063 TMEM68Q96MH6 324 aa12.56□□□□□ -0.4
TRAFD1-203ENST00000547063 RBKSQ9H477 322 aa12.56□□□□□ -0.4
TRAFD1-203ENST00000547063 ZNF469Q96JG9 3925 aaPredicted RBP12.56□□□□□ -0.4
TRAFD1-203ENST00000547063 MTORP42345 2549 aa12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 IGHV7-81A0A0B4J1V7 117 aa12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 E5RGE8 158 aa12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 TRIM77I1YAP6 450 aa12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 SSSCA1O60232 199 aa12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 NXPH3O95157 252 aa12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 AMY1AP04745 511 aa12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 ATP5IP56385 69 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms