RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 TET2Q6N021 2002 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-211ENST00000546215 A0A1B0GW64 132 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 A0A1W2PN81 502 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 P0C879 139 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 PSMB8P28062 276 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 CHRNA7P36544 502 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 RPL27AP46776 148 aaKnown RBP16.26■□□□□ 0.19
SCARB1-211ENST00000546215 FOXE3Q13461 319 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 H2BFWTQ7Z2G1 175 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 RNF152Q8N8N0 203 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 TMEM68Q96MH6 324 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 FOXA2Q9Y261 457 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-211ENST00000546215 NSG2Q9Y328 171 aa16.26■□□□□ 0.19
SCARB1-211ENST00000546215 ELANEP08246 267 aa16.25■□□□□ 0.19
SCARB1-211ENST00000546215 SELENOHQ8IZQ5 122 aaKnown RBP16.25■□□□□ 0.19
SCARB1-211ENST00000546215 RBPMSQ93062 196 aaKnown RBP16.25■□□□□ 0.19
SCARB1-211ENST00000546215 TSC22D3Q99576 134 aa16.25■□□□□ 0.19
SCARB1-211ENST00000546215 PHB2Q99623 299 aa16.25■□□□□ 0.19
SCARB1-211ENST00000546215 SPIN2AQ99865 258 aa16.25■□□□□ 0.19
SCARB1-211ENST00000546215 SPIN2BQ9BPZ2 258 aa16.25■□□□□ 0.19
SCARB1-211ENST00000546215 PRR13Q9NZ81 148 aa16.25■□□□□ 0.19
SCARB1-211ENST00000546215 VWFP04275 2813 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 TCRBV4S1A1TA0A5B7 111 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 CGB1A6NKQ9 187 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 ADARB2-AS1A8MUL3 147 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 TEX22C9J3V5 150 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 SNAPC5O75971 98 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 ATG12O94817 140 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 OPN1MWP04001 364 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 APELAP0DMC3 54 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 OPN1MW2P0DN77 364 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 OPN1MW3P0DN78 364 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 AKR1C2P52895 323 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 PPP1R1AQ13522 171 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 LCNL1Q6ZST4 164 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 ZNF695Q8IW36 515 aa16.24■□□□□ 0.19
SCARB1-211ENST00000546215 DBX1A6NMT0 343 aa16.23■□□□□ 0.19
SCARB1-211ENST00000546215 TCRBP04435 133 aa16.23■□□□□ 0.19
SCARB1-211ENST00000546215 RPLP1P05386 114 aaKnown RBP16.23■□□□□ 0.19
SCARB1-211ENST00000546215 ANXA3P12429 323 aa16.23■□□□□ 0.19
SCARB1-211ENST00000546215 OR2B8PP59922 312 aa16.23■□□□□ 0.19
SCARB1-211ENST00000546215 UBE2MP61081 183 aaKnown RBP16.23■□□□□ 0.19
SCARB1-211ENST00000546215 IZUMO4Q1ZYL8 232 aa16.23■□□□□ 0.19
SCARB1-211ENST00000546215 TMEM268Q5VZI3 342 aa16.23■□□□□ 0.19
SCARB1-211ENST00000546215 MZT2BQ6NZ67 158 aa16.23■□□□□ 0.19
SCARB1-211ENST00000546215 NDUFA11Q86Y39 141 aa16.23■□□□□ 0.19
SCARB1-211ENST00000546215 OR5T1Q8NG75 326 aa16.23■□□□□ 0.19
SCARB1-211ENST00000546215 OR5M8Q8NGP6 311 aa16.23■□□□□ 0.19
SCARB1-211ENST00000546215 IL22RA2Q969J5 263 aa16.23■□□□□ 0.19
SCARB1-211ENST00000546215 COMMD5Q9GZQ3 224 aa16.23■□□□□ 0.19
SCARB1-211ENST00000546215 KLK15Q9H2R5 256 aa16.23■□□□□ 0.19
SCARB1-211ENST00000546215 TMEM14BQ9NUH8 114 aa16.23■□□□□ 0.19
SCARB1-211ENST00000546215 TSSC4Q9Y5U2 329 aaPredicted RBP16.23■□□□□ 0.19
SCARB1-211ENST00000546215 A0A0G2JRQ6 117 aa16.22■□□□□ 0.19
SCARB1-211ENST00000546215 TEX50A0A1B0GTY4 177 aa16.22■□□□□ 0.19
SCARB1-211ENST00000546215 HMX3A6NHT5 357 aa16.22■□□□□ 0.19
SCARB1-211ENST00000546215 C15orf61A6NNL5 157 aa16.22■□□□□ 0.19
SCARB1-211ENST00000546215 VAMP1P23763 118 aa16.22■□□□□ 0.19
SCARB1-211ENST00000546215 CXorf66Q5JRM2 361 aaPredicted RBP16.22■□□□□ 0.19
SCARB1-211ENST00000546215 FYTTD1Q96QD9 318 aaKnown RBP16.22■□□□□ 0.19
SCARB1-211ENST00000546215 C20orf85Q9H1P6 137 aa16.22■□□□□ 0.19
SCARB1-211ENST00000546215 PRNDQ9UKY0 176 aa16.22■□□□□ 0.19
SCARB1-211ENST00000546215 CMYA5Q8N3K9 4069 aa16.22■□□□□ 0.19
SCARB1-211ENST00000546215 A0A0B4J293 547 aa16.21■□□□□ 0.19
SCARB1-211ENST00000546215 FAM240BA0A1B0GVZ2 78 aa16.21■□□□□ 0.19
SCARB1-211ENST00000546215 SFT2D2O95562 160 aa16.21■□□□□ 0.19
SCARB1-211ENST00000546215 ANXA7P20073 488 aaKnown RBP16.21■□□□□ 0.19
SCARB1-211ENST00000546215 OR4A16Q8NH70 328 aa16.21■□□□□ 0.19
SCARB1-211ENST00000546215 MYOZ3Q8TDC0 251 aa16.21■□□□□ 0.19
SCARB1-211ENST00000546215 CASTOR1Q8WTX7 329 aa16.21■□□□□ 0.19
SCARB1-211ENST00000546215 RRNAD1Q96FB5 475 aaKnown RBP16.21■□□□□ 0.19
SCARB1-211ENST00000546215 ZFP57Q9NU63 452 aa16.21■□□□□ 0.19
SCARB1-211ENST00000546215 FKBP11Q9NYL4 201 aa16.21■□□□□ 0.19
SCARB1-211ENST00000546215 OR51B2Q9Y5P1 312 aa16.21■□□□□ 0.19
SCARB1-211ENST00000546215 PF4V1P10720 104 aa16.21■□□□□ 0.18
SCARB1-211ENST00000546215 RAB9AP51151 201 aa16.21■□□□□ 0.18
SCARB1-211ENST00000546215 KIAA0141Q14154 515 aaPredicted RBP16.21■□□□□ 0.18
SCARB1-211ENST00000546215 NSUN5P1Q3KNT7 163 aa16.21■□□□□ 0.18
SCARB1-211ENST00000546215 ANKRD55Q3KP44 614 aa16.21■□□□□ 0.18
SCARB1-211ENST00000546215 FAM219AQ8IW50 185 aa16.21■□□□□ 0.18
SCARB1-211ENST00000546215 LGI3Q8N145 548 aa16.21■□□□□ 0.18
SCARB1-211ENST00000546215 SLC35G3Q8N808 338 aa16.21■□□□□ 0.18
SCARB1-211ENST00000546215 OR1L8Q8NGR8 309 aa16.21■□□□□ 0.18
SCARB1-211ENST00000546215 FAM110DQ8TAY7 271 aaPredicted RBP16.21■□□□□ 0.18
SCARB1-211ENST00000546215 QTRT1Q9BXR0 403 aaKnown RBP16.21■□□□□ 0.18
SCARB1-211ENST00000546215 NDUFA4L2Q9NRX3 87 aa16.21■□□□□ 0.18
SCARB1-211ENST00000546215 WNK1Q9H4A3 2382 aa16.21■□□□□ 0.18
SCARB1-211ENST00000546215 OR4E1P0C645 316 aa16.2■□□□□ 0.18
SCARB1-211ENST00000546215 RPL23AP62750 156 aaKnown RBP16.2■□□□□ 0.18
SCARB1-211ENST00000546215 SRPXP78539 464 aa16.2■□□□□ 0.18
SCARB1-211ENST00000546215 KHDC1LQ5JSQ8 128 aa16.2■□□□□ 0.18
SCARB1-211ENST00000546215 TMEM65Q6PI78 240 aa16.2■□□□□ 0.18
SCARB1-211ENST00000546215 Q6ZRM9 215 aa16.2■□□□□ 0.18
SCARB1-211ENST00000546215 TTC9CQ8N5M4 171 aa16.2■□□□□ 0.18
SCARB1-211ENST00000546215 OR5B3Q8NH48 314 aa16.2■□□□□ 0.18
SCARB1-211ENST00000546215 LSM10Q969L4 123 aaKnown RBP16.2■□□□□ 0.18
SCARB1-211ENST00000546215 ALX4Q9H161 411 aaPredicted RBP16.2■□□□□ 0.18
SCARB1-211ENST00000546215 NUDT15Q9NV35 164 aa16.2■□□□□ 0.18
SCARB1-211ENST00000546215 TRAV6A0A075B6T7 132 aa16.19■□□□□ 0.18
SCARB1-211ENST00000546215 A0A0B4J2A0 478 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms