RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 NMSQ5H8A3 153 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 STPG2Q8N412 459 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 GRPEL2Q8TAA5 225 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 VSTM2AQ8TAG5 236 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 TMEM158Q8WZ71 300 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 WSB1Q9Y6I7 421 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 MPTX1A8MV57 137 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 SOX15O60248 233 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 PTTG1O95997 202 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 AKR1C2P52895 323 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 ERVK-16P61578 105 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 RPL8P62917 257 aaKnown RBP12.79□□□□□ -0.36
LIMS2-217ENST00000545738 CFHR3Q02985 330 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 ZNF329Q86UD4 541 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 ZNF695Q8IW36 515 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 MMD2Q8IY49 270 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 KLHDC1Q8N7A1 406 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 LRTM2Q8N967 370 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 SRSF12Q8WXF0 261 aaKnown RBP12.79□□□□□ -0.36
LIMS2-217ENST00000545738 ARPC1AQ92747 370 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 GPR146Q96CH1 333 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 MMP24Q9Y5R2 645 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 VWFP04275 2813 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 TEX22C9J3V5 150 aa12.78□□□□□ -0.36
LIMS2-217ENST00000545738 HAX1O00165 279 aa12.78□□□□□ -0.36
LIMS2-217ENST00000545738 HLA-GP17693 338 aa12.78□□□□□ -0.36
LIMS2-217ENST00000545738 PLET1Q6UQ28 207 aa12.78□□□□□ -0.36
LIMS2-217ENST00000545738 C19orf35Q6ZS72 473 aa12.78□□□□□ -0.36
LIMS2-217ENST00000545738 H2BFWTQ7Z2G1 175 aa12.78□□□□□ -0.36
LIMS2-217ENST00000545738 CADM3Q8N126 398 aa12.78□□□□□ -0.36
LIMS2-217ENST00000545738 LFNGQ8NES3 379 aa12.78□□□□□ -0.36
LIMS2-217ENST00000545738 IL22RA2Q969J5 263 aa12.78□□□□□ -0.36
LIMS2-217ENST00000545738 TMEM14BQ9NUH8 114 aa12.78□□□□□ -0.36
LIMS2-217ENST00000545738 A0A0B4J2A0 478 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 HMX3A6NHT5 357 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 C15orf61A6NNL5 157 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 INMT-MINDY4F8WBC2 141 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 ADAP1O75689 374 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 DUS4LO95620 317 aaKnown RBP12.77□□□□□ -0.36
LIMS2-217ENST00000545738 ANXA3P12429 323 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 PPIFP30405 207 aaKnown RBP12.77□□□□□ -0.36
LIMS2-217ENST00000545738 CRIP2P52943 208 aaPredicted RBP12.77□□□□□ -0.36
LIMS2-217ENST00000545738 FOXL1Q12952 345 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 ECSCRQ19T08 205 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 ARSJQ5FYB0 599 aaPredicted RBP12.77□□□□□ -0.36
LIMS2-217ENST00000545738 TCTEX1D4Q5JR98 221 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 LGI3Q8N145 548 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 OR4A5Q8NH83 315 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 SGMS2Q8NHU3 365 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 MITD1Q8WV92 249 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 WFDC12Q8WWY7 111 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 QTRT1Q9BXR0 403 aaKnown RBP12.77□□□□□ -0.36
LIMS2-217ENST00000545738 SHPKQ9UHJ6 478 aa12.77□□□□□ -0.36
LIMS2-217ENST00000545738 MSGN1A6NI15 193 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 AP4M1O00189 453 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 KCNAB3O43448 404 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 CNIH1O95406 144 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 LCNL1Q6ZST4 164 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 AIFM2Q9BRQ8 373 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 TEX50A0A1B0GTY4 177 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 VDAC1P21796 283 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 OXA1LQ15070 435 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 C2orf68Q2NKX9 166 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 C11orf87Q6NUJ2 197 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 FAM219AQ8IW50 185 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 C11orf44Q8N8P7 122 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 OR10W1Q8NGF6 305 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 ZNF431Q8TF32 576 aaPredicted RBP12.76□□□□□ -0.37
LIMS2-217ENST00000545738 ABHD5Q8WTS1 349 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 LSM10Q969L4 123 aaKnown RBP12.76□□□□□ -0.37
LIMS2-217ENST00000545738 CACNG5Q9UF02 275 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 CMYA5Q8N3K9 4069 aa12.76□□□□□ -0.37
LIMS2-217ENST00000545738 hCG_2014768A0A024R1R8 64 aa12.75□□□□□ -0.37
LIMS2-217ENST00000545738 IL5P05113 134 aa12.75□□□□□ -0.37
LIMS2-217ENST00000545738 HOXB5P09067 269 aa12.75□□□□□ -0.37
LIMS2-217ENST00000545738 AREGP15514 252 aa12.75□□□□□ -0.37
LIMS2-217ENST00000545738 RGS21Q2M5E4 152 aa12.75□□□□□ -0.37
LIMS2-217ENST00000545738 SPINK9Q5DT21 86 aa12.75□□□□□ -0.37
LIMS2-217ENST00000545738 FOXRED2Q8IWF2 684 aa12.75□□□□□ -0.37
LIMS2-217ENST00000545738 MINDY2Q8NBR6 621 aa12.75□□□□□ -0.37
LIMS2-217ENST00000545738 RRNAD1Q96FB5 475 aaKnown RBP12.75□□□□□ -0.37
LIMS2-217ENST00000545738 FOXA2Q9Y261 457 aaPredicted RBP12.75□□□□□ -0.37
LIMS2-217ENST00000545738 OR51B2Q9Y5P1 312 aa12.75□□□□□ -0.37
LIMS2-217ENST00000545738 TRAV41A0A0B4J266 112 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 ST8SIA3O43173 380 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 RBMXL2O75526 392 aaKnown RBP12.74□□□□□ -0.37
LIMS2-217ENST00000545738 NXPH3O95157 252 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 FGF2P09038 288 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 RPL27AP46776 148 aaKnown RBP12.74□□□□□ -0.37
LIMS2-217ENST00000545738 GGNBP1Q5YKI7 109 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 FYTTD1Q96QD9 318 aaKnown RBP12.74□□□□□ -0.37
LIMS2-217ENST00000545738 NDUFA4L2Q9NRX3 87 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 ZNF580Q9UK33 172 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 IGLC7A0M8Q6 106 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 CCSO14618 274 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 ACTL6BO94805 426 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 CD28P10747 220 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 MAS1LP35410 378 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 SRPXP78539 464 aa12.74□□□□□ -0.37
LIMS2-217ENST00000545738 WT1-ASQ06250 92 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms