RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 IGHV3-35A0A0C4DH35 117 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 IGLC7A0M8Q6 106 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 RAB27BO00194 218 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 NDUFA4O00483 81 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 MYL12BO14950 172 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 DENRO43583 198 aaKnown RBP10.72□□□□□ -0.69
RTN3-214ENST00000545432 CTSDP07339 412 aaPredicted RBP10.72□□□□□ -0.69
RTN3-214ENST00000545432 OR2B8PP59922 312 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 RPL8P62917 257 aaKnown RBP10.72□□□□□ -0.69
RTN3-214ENST00000545432 TMEM91Q6ZNR0 172 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 APRG1Q8IVJ8 170 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 C10orf67Q8IYJ2 551 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 PQLC1Q8N2U9 271 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 Q8NAQ8 132 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 RAB3CQ96E17 227 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 DCUN1D5Q9BTE7 237 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 BET1LQ9NYM9 111 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 LSM2Q9Y333 95 aaKnown RBP10.72□□□□□ -0.69
RTN3-214ENST00000545432 OR2W1Q9Y3N9 320 aa10.72□□□□□ -0.69
RTN3-214ENST00000545432 ERICH4A6NGS2 130 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 XRCC3O43542 346 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 FGF2P09038 288 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 DEFA4P12838 97 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 HLA-GP17693 338 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 RANBP1P43487 201 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 MRPS15P82914 257 aaKnown RBP10.71□□□□□ -0.69
RTN3-214ENST00000545432 PLA2G7Q13093 441 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 RAB11BQ15907 218 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 SSX9Q7RTT3 188 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 OR4S2Q8NH73 311 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 OR4A5Q8NH83 315 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 CYGBQ8WWM9 190 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 HSD17B10Q99714 261 aaKnown RBP10.71□□□□□ -0.69
RTN3-214ENST00000545432 PLGRKTQ9HBL7 147 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 S100A14Q9HCY8 104 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 THYN1Q9P016 225 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 RAB22AQ9UL26 194 aa10.71□□□□□ -0.69
RTN3-214ENST00000545432 F8W735 103 aaPredicted RBP10.7□□□□□ -0.7
RTN3-214ENST00000545432 REG1AP05451 166 aa10.7□□□□□ -0.7
RTN3-214ENST00000545432 ZNF124Q15973 351 aa10.7□□□□□ -0.7
RTN3-214ENST00000545432 LGALS9BQ3B8N2 356 aa10.7□□□□□ -0.7
RTN3-214ENST00000545432 FAM90A2PQ658T7 463 aa10.7□□□□□ -0.7
RTN3-214ENST00000545432 SPSB3Q6PJ21 355 aa10.7□□□□□ -0.7
RTN3-214ENST00000545432 MFSD4AQ8N468 514 aa10.7□□□□□ -0.7
RTN3-214ENST00000545432 OR10R2Q8NGX6 335 aa10.7□□□□□ -0.7
RTN3-214ENST00000545432 MAFIPQ8WZ33 124 aa10.7□□□□□ -0.7
RTN3-214ENST00000545432 BSCL2Q96G97 398 aaPredicted RBP10.7□□□□□ -0.7
RTN3-214ENST00000545432 RNF126Q9BV68 326 aa10.7□□□□□ -0.7
RTN3-214ENST00000545432 SMPXQ9UHP9 88 aa10.7□□□□□ -0.7
RTN3-214ENST00000545432 AK6Q9Y3D8 172 aaKnown RBP10.7□□□□□ -0.7
RTN3-214ENST00000545432 IGHV4-4A0A075B6R2 117 aa10.69□□□□□ -0.7
RTN3-214ENST00000545432 TMEM272A0A1B0GTI8 110 aa10.69□□□□□ -0.7
RTN3-214ENST00000545432 C15orf62A8K5M9 175 aa10.69□□□□□ -0.7
RTN3-214ENST00000545432 HRASP01112 189 aa10.69□□□□□ -0.7
RTN3-214ENST00000545432 CTXN2P0C2S0 81 aa10.69□□□□□ -0.7
RTN3-214ENST00000545432 RPA2P15927 270 aa10.69□□□□□ -0.7
RTN3-214ENST00000545432 HIST1H1DP16402 221 aaKnown RBP10.69□□□□□ -0.7
RTN3-214ENST00000545432 CD36P16671 472 aa10.69□□□□□ -0.7
RTN3-214ENST00000545432 DTYMKP23919 212 aa10.69□□□□□ -0.7
RTN3-214ENST00000545432 CLDN12P56749 244 aa10.69□□□□□ -0.7
RTN3-214ENST00000545432 POU2AF1Q16633 256 aa10.69□□□□□ -0.7
RTN3-214ENST00000545432 NR2C2APQ86WQ0 139 aa10.69□□□□□ -0.7
RTN3-214ENST00000545432 POM121L12Q8N7R1 296 aa10.69□□□□□ -0.7
RTN3-214ENST00000545432 RNF2Q99496 336 aa10.69□□□□□ -0.7
RTN3-214ENST00000545432 CHRDL1Q9BU40 450 aa10.69□□□□□ -0.7
RTN3-214ENST00000545432 LRP1BQ9NZR2 4599 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 TRAV10A0A0B4J240 114 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 IGKV1D-13A0A0B4J2D9 117 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 C15orf61A6NNL5 157 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 CHEK1O14757 476 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 DEFB4AO15263 64 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 MRPS14O60783 128 aaKnown RBP10.68□□□□□ -0.7
RTN3-214ENST00000545432 RBMY1A1P0DJD3 496 aaKnown RBP10.68□□□□□ -0.7
RTN3-214ENST00000545432 RBMY1CP0DJD4 496 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 IGKV1-13P0DP09 117 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 GNB3P16520 340 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 TMEM187Q14656 261 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 RBMY1FQ15415 496 aaKnown RBP10.68□□□□□ -0.7
RTN3-214ENST00000545432 SPHARQ15513 63 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 OR2B11Q5JQS5 317 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 PVRIGQ6DKI7 326 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 ZNF66Q6ZN08 573 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 AHSA2Q719I0 299 aa10.68□□□□□ -0.7
RTN3-214ENST00000545432 GIG44P09565 113 aaPredicted RBP10.67□□□□□ -0.7
RTN3-214ENST00000545432 HLA-DMBP28068 263 aa10.67□□□□□ -0.7
RTN3-214ENST00000545432 MSMO1Q15800 293 aa10.67□□□□□ -0.7
RTN3-214ENST00000545432 TIMM50Q3ZCQ8 353 aa10.67□□□□□ -0.7
RTN3-214ENST00000545432 OR10C1Q96KK4 312 aa10.67□□□□□ -0.7
RTN3-214ENST00000545432 AIFM2Q9BRQ8 373 aa10.67□□□□□ -0.7
RTN3-214ENST00000545432 MND1Q9BWT6 205 aa10.67□□□□□ -0.7
RTN3-214ENST00000545432 V9GY05 133 aa10.67□□□□□ -0.7
RTN3-214ENST00000545432 IGHV7-4-1A0A0J9YVY3 117 aa10.66□□□□□ -0.7
RTN3-214ENST00000545432 OR2T8A6NH00 312 aa10.66□□□□□ -0.7
RTN3-214ENST00000545432 ZNF705EA8MWA4 302 aaPredicted RBP10.66□□□□□ -0.7
RTN3-214ENST00000545432 RBFOX2O43251 390 aaKnown RBP eCLIP10.66□□□□□ -0.7
RTN3-214ENST00000545432 ARL6IP5O75915 188 aa10.66□□□□□ -0.7
RTN3-214ENST00000545432 AMBPP02760 352 aa10.66□□□□□ -0.7
RTN3-214ENST00000545432 CTSGP08311 255 aa10.66□□□□□ -0.7
RTN3-214ENST00000545432 RAB6AP20340 208 aa10.66□□□□□ -0.7
RTN3-214ENST00000545432 NFYAP23511 347 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms