RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 HSPB11Q9Y547 144 aa11.04□□□□□ -0.64
SCARB1-209ENST00000545305 A0A0D9SG52 128 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 NCBP2LA6PVI3 153 aaKnown RBP11.03□□□□□ -0.64
SCARB1-209ENST00000545305 OR2F2O95006 317 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 NDUFA3O95167 84 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 MAS1LP35410 378 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 CAV2P51636 162 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 AP2S1P53680 142 aaPredicted RBP11.03□□□□□ -0.64
SCARB1-209ENST00000545305 TAS2R30P59541 319 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 OR2F1Q13607 317 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 ZNF345Q14585 488 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 PRSS8Q16651 343 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 FAM120AOSQ5T036 256 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 Q8N6K4 173 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 OR1L8Q8NGR8 309 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 HINT2Q9BX68 163 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 SLC25A31Q9H0C2 315 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 FBXL15Q9H469 300 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 ZNF430Q9H8G1 570 aaPredicted RBP11.03□□□□□ -0.64
SCARB1-209ENST00000545305 TPSG1Q9NRR2 321 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 WSB1Q9Y6I7 421 aa11.03□□□□□ -0.64
SCARB1-209ENST00000545305 MAP1AP78559 2803 aaPredicted RBP11.02□□□□□ -0.65
SCARB1-209ENST00000545305 CRYGBP07316 175 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 CXCL2P19875 107 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 HNF1AP20823 631 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 RPL12P30050 165 aaKnown RBP11.02□□□□□ -0.65
SCARB1-209ENST00000545305 PRCDQ00LT1 54 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 TNXAQ16473 311 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 AANATQ16613 207 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 PDLIM3Q53GG5 364 aaPredicted RBP11.02□□□□□ -0.65
SCARB1-209ENST00000545305 SPINK9Q5DT21 86 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 SPNS3Q6ZMD2 512 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 C9orf139Q6ZV77 190 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 PPP1R27Q86WC6 154 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 MRPL41Q8IXM3 137 aaKnown RBP11.02□□□□□ -0.65
SCARB1-209ENST00000545305 OR2C3Q8N628 320 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 ZDHHC16Q969W1 377 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 SMIM8Q96KF7 97 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 AQP10Q96PS8 301 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 SSX3Q99909 188 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 HIPK2Q9H2X6 1198 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 PLEKHA3Q9HB20 300 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 YAE1D1Q9NRH1 226 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 LYRM2Q9NU23 88 aaPredicted RBP11.02□□□□□ -0.65
SCARB1-209ENST00000545305 PSENENQ9NZ42 101 aa11.02□□□□□ -0.65
SCARB1-209ENST00000545305 ABCA1O95477 2261 aa11.01□□□□□ -0.65
SCARB1-209ENST00000545305 A0A1W2PN81 502 aa11.01□□□□□ -0.65
SCARB1-209ENST00000545305 RNF222A6NCQ9 220 aa11.01□□□□□ -0.65
SCARB1-209ENST00000545305 TSC22D2O75157 780 aa11.01□□□□□ -0.65
SCARB1-209ENST00000545305 CHRNA7P36544 502 aa11.01□□□□□ -0.65
SCARB1-209ENST00000545305 SRP14P37108 136 aaKnown RBP11.01□□□□□ -0.65
SCARB1-209ENST00000545305 F2RL1P55085 397 aa11.01□□□□□ -0.65
SCARB1-209ENST00000545305 GNB1P62873 340 aa11.01□□□□□ -0.65
SCARB1-209ENST00000545305 RPP30P78346 268 aaKnown RBP11.01□□□□□ -0.65
SCARB1-209ENST00000545305 C5orf64Q2M2E5 130 aa11.01□□□□□ -0.65
SCARB1-209ENST00000545305 LGALSLQ3ZCW2 172 aaPredicted RBP11.01□□□□□ -0.65
SCARB1-209ENST00000545305 TMUB2Q71RG4 321 aa11.01□□□□□ -0.65
SCARB1-209ENST00000545305 STX12Q86Y82 276 aa11.01□□□□□ -0.65
SCARB1-209ENST00000545305 KCNRGQ8N5I3 272 aa11.01□□□□□ -0.65
SCARB1-209ENST00000545305 ARL6Q9H0F7 186 aa11.01□□□□□ -0.65
SCARB1-209ENST00000545305 C11orf1Q9H5F2 150 aa11.01□□□□□ -0.65
SCARB1-209ENST00000545305 HEYLQ9NQ87 328 aaPredicted RBP11.01□□□□□ -0.65
SCARB1-209ENST00000545305 PITPNC1Q9UKF7 332 aa11.01□□□□□ -0.65
SCARB1-209ENST00000545305 TEX50A0A1B0GTY4 177 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 KANTRA0A1W2PQU2 76 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 BTBD17A6NE02 478 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 MSGN1A6NI15 193 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 H3BP45 60 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 H3BUX3 64 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 OPN1MWP04001 364 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 OPN1MW2P0DN77 364 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 OPN1MW3P0DN78 364 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 HKR1P10072 659 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 MYOD1P15172 320 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 S100A11P31949 105 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 RPL27AP46776 148 aaKnown RBP11□□□□□ -0.65
SCARB1-209ENST00000545305 KRTAP1-1Q07627 177 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 PJVKQ0ZLH3 352 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 DEFB112Q30KQ8 113 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 SPANXN5Q5MJ07 72 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 LAMTOR1Q6IAA8 161 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 RASL11BQ9BPW5 248 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 PAIP2BQ9ULR5 123 aaKnown RBP11□□□□□ -0.65
SCARB1-209ENST00000545305 MOB4Q9Y3A3 225 aa11□□□□□ -0.65
SCARB1-209ENST00000545305 STRAPQ9Y3F4 350 aaKnown RBP11□□□□□ -0.65
SCARB1-209ENST00000545305 SOX21Q9Y651 276 aaPredicted RBP11□□□□□ -0.65
SCARB1-209ENST00000545305 VPS13CQ709C8 3753 aa10.99□□□□□ -0.65
SCARB1-209ENST00000545305 IGSF23A1L1A6 192 aa10.99□□□□□ -0.65
SCARB1-209ENST00000545305 FAM24AA6NFZ4 105 aa10.99□□□□□ -0.65
SCARB1-209ENST00000545305 KCNAB3O43448 404 aa10.99□□□□□ -0.65
SCARB1-209ENST00000545305 SCAF4O95104 1147 aaKnown RBP10.99□□□□□ -0.65
SCARB1-209ENST00000545305 CNIH1O95406 144 aa10.99□□□□□ -0.65
SCARB1-209ENST00000545305 TMEM50AO95807 157 aa10.99□□□□□ -0.65
SCARB1-209ENST00000545305 CA2P00918 260 aa10.99□□□□□ -0.65
SCARB1-209ENST00000545305 COMPP49747 757 aaPredicted RBP10.99□□□□□ -0.65
SCARB1-209ENST00000545305 PAX9P55771 341 aa10.99□□□□□ -0.65
SCARB1-209ENST00000545305 EWSR1Q01844 656 aaKnown RBP eCLIP10.99□□□□□ -0.652e-7■■■□□ 14.6
SCARB1-209ENST00000545305 BAXQ07812 192 aa10.99□□□□□ -0.65
SCARB1-209ENST00000545305 FBLN7Q53RD9 439 aa10.99□□□□□ -0.65
SCARB1-209ENST00000545305 BCL6BQ8N143 479 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms