RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 LY6HO94772 140 aa13.52□□□□□ -0.24
CHFR-224ENST00000545046 OR13C7P0DN81 318 aa13.52□□□□□ -0.24
CHFR-224ENST00000545046 NPY1RP25929 384 aa13.52□□□□□ -0.24
CHFR-224ENST00000545046 DLK1P80370 383 aa13.52□□□□□ -0.24
CHFR-224ENST00000545046 ZNF506Q5JVG8 444 aa13.52□□□□□ -0.24
CHFR-224ENST00000545046 FFAR4Q5NUL3 377 aa13.52□□□□□ -0.24
CHFR-224ENST00000545046 DTX2Q86UW9 622 aa13.52□□□□□ -0.24
CHFR-224ENST00000545046 SLC24A4Q8NFF2 622 aa13.52□□□□□ -0.24
CHFR-224ENST00000545046 PLEKHA3Q9HB20 300 aa13.52□□□□□ -0.24
CHFR-224ENST00000545046 WDR83OSQ9Y284 106 aa13.52□□□□□ -0.24
CHFR-224ENST00000545046 hCG_1809904A0A1W2PP81 198 aa13.52□□□□□ -0.25
CHFR-224ENST00000545046 A0A1W2PPE2 198 aa13.52□□□□□ -0.25
CHFR-224ENST00000545046 A0A1W2PR64 198 aa13.52□□□□□ -0.25
CHFR-224ENST00000545046 A0A1W2PRV1 198 aa13.52□□□□□ -0.25
CHFR-224ENST00000545046 MC5RP33032 325 aa13.52□□□□□ -0.25
CHFR-224ENST00000545046 RAB13P51153 203 aa13.52□□□□□ -0.25
CHFR-224ENST00000545046 PRCDQ00LT1 54 aa13.52□□□□□ -0.25
CHFR-224ENST00000545046 DIAPH2-AS1Q14236 149 aa13.52□□□□□ -0.25
CHFR-224ENST00000545046 WDR25Q64LD2 544 aaPredicted RBP13.52□□□□□ -0.25
CHFR-224ENST00000545046 ACSM6Q6P461 480 aa13.52□□□□□ -0.25
CHFR-224ENST00000545046 UNKLQ9H9P5 680 aaKnown RBP13.52□□□□□ -0.25
CHFR-224ENST00000545046 WASHC3Q9Y3C0 194 aa13.52□□□□□ -0.25
CHFR-224ENST00000545046 TEX50A0A1B0GTY4 177 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 MPDU1O75352 247 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 RBP4P02753 201 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 MYOD1P15172 320 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 ICAM4Q14773 271 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 KHDC3LQ587J8 217 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 OR10G4Q8NGN3 311 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 OR10G9Q8NGN4 311 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 OR10G7Q8NGN6 311 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 C8orf46Q8TAG6 207 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 HIVEP3Q5T1R4 2406 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 LRBAP50851 2863 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 IGHV2-26A0A0B4J1V2 119 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 MAP1LC3B2A6NCE7 125 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 PRSS46E5RG02 174 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 HSPB1P04792 205 aaKnown RBP13.51□□□□□ -0.25
CHFR-224ENST00000545046 SOHLH1Q5JUK2 328 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 SSX7Q7RTT5 188 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 RPP25LQ8N5L8 163 aaKnown RBP13.51□□□□□ -0.25
CHFR-224ENST00000545046 OR5B3Q8NH48 314 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 VSTM2AQ8TAG5 236 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 RXFP4Q8TDU9 374 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 MAP1LC3BQ9GZQ8 125 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 GNG13Q9P2W3 67 aa13.51□□□□□ -0.25
CHFR-224ENST00000545046 CA2P00918 260 aa13.5□□□□□ -0.25
CHFR-224ENST00000545046 USF1P22415 310 aaPredicted RBP13.5□□□□□ -0.25
CHFR-224ENST00000545046 FGF8P55075 233 aaPredicted RBP13.5□□□□□ -0.25
CHFR-224ENST00000545046 TMEM88Q6PEY1 159 aa13.5□□□□□ -0.25
CHFR-224ENST00000545046 OR4A5Q8NH83 315 aa13.5□□□□□ -0.25
CHFR-224ENST00000545046 TMEM170AQ8WVE7 144 aa13.5□□□□□ -0.25
CHFR-224ENST00000545046 CLEC7AQ9BXN2 247 aa13.5□□□□□ -0.25
CHFR-224ENST00000545046 CHODLQ9H9P2 273 aa13.5□□□□□ -0.25
CHFR-224ENST00000545046 CACNA1AO00555 2505 aa13.5□□□□□ -0.25
CHFR-224ENST00000545046 SOX15O60248 233 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 IFNA1P01562 189 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 IGKV1D-33P01593 117 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 IGKV1-33P01594 117 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 OPN1MWP04001 364 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 LIPFP07098 398 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 SRP19P09132 144 aaKnown RBP13.49□□□□□ -0.25
CHFR-224ENST00000545046 OPN1MW2P0DN77 364 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 OPN1MW3P0DN78 364 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 ACOT6Q3I5F7 207 aaPredicted RBP13.49□□□□□ -0.25
CHFR-224ENST00000545046 TREML4Q6UXN2 200 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 ACTR3CQ9C0K3 210 aaPredicted RBP13.49□□□□□ -0.25
CHFR-224ENST00000545046 COMMD5Q9GZQ3 224 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 NPVFQ9HCQ7 196 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 CTXND1A0A1B0GTU2 59 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 LOC102723971A0A1B0GUV8 181 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 CYB5BO43169 146 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 RPL8P62917 257 aaKnown RBP13.49□□□□□ -0.25
CHFR-224ENST00000545046 HLA-DRB5Q30154 266 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 MALRD1Q5VYJ5 2156 aa13.49□□□□□ -0.25
CHFR-224ENST00000545046 ZFP92A6NM28 416 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 ATP5IP56385 69 aaPredicted RBP13.48□□□□□ -0.25
CHFR-224ENST00000545046 AKIRIN2Q53H80 203 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 CBLN2Q8IUK8 224 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 TMEM167AQ8TBQ9 72 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 ONECUT1Q9UBC0 465 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 TPRP12270 2363 aaKnown RBP13.48□□□□□ -0.25
CHFR-224ENST00000545046 M0R036 132 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 ENSAO43768 121 aaKnown RBP13.48□□□□□ -0.25
CHFR-224ENST00000545046 IGLV1-47P01700 117 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 CEBPGP53567 150 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 VMA21Q3ZAQ7 101 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 FAM122CQ6P4D5 195 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 LY6G5BQ8NDX9 201 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 BEND2Q8NDZ0 799 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 OR1L8Q8NGR8 309 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 SLC25A22Q9H936 323 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 UBTD1Q9HAC8 227 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 PATZ1Q9HBE1 687 aaKnown RBP13.48□□□□□ -0.25
CHFR-224ENST00000545046 AMMECR1Q9Y4X0 333 aaPredicted RBP13.48□□□□□ -0.25
CHFR-224ENST00000545046 RELNP78509 3460 aa13.48□□□□□ -0.25
CHFR-224ENST00000545046 BCL2P10415 239 aa13.47□□□□□ -0.25
CHFR-224ENST00000545046 RBMS3Q6XE24 437 aaKnown RBP13.47□□□□□ -0.25
CHFR-224ENST00000545046 RPS10P5Q9NQ39 176 aa13.47□□□□□ -0.25
CHFR-224ENST00000545046 A0A1W2PPR1 153 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms