RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	FANCD2OS	Q96PS1	177 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	DMRT1	Q9Y5R6	373 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	DPPA5	A6NC42	116 aa		10.23	□□□□□ -0.77
POLE-222	ENST00000545015	BMPR1B	O00238	502 aa		10.23	□□□□□ -0.77
POLE-222	ENST00000545015	DHFR	P00374	187 aa		10.23	□□□□□ -0.77
POLE-222	ENST00000545015	PRH1	P02810	166 aa		10.23	□□□□□ -0.77
POLE-222	ENST00000545015	GP9	P14770	177 aa		10.23	□□□□□ -0.77
POLE-222	ENST00000545015	HIST1H1B	P16401	226 aa	Known RBP	10.23	□□□□□ -0.77
POLE-222	ENST00000545015	MECP2	P51608	486 aa	Known RBP	10.23	□□□□□ -0.77
POLE-222	ENST00000545015	DEFA5	Q01523	94 aa		10.23	□□□□□ -0.77
POLE-222	ENST00000545015	EXOSC2	Q13868	293 aa	Known RBP	10.23	□□□□□ -0.77
POLE-222	ENST00000545015	GPR141	Q7Z602	305 aa		10.23	□□□□□ -0.77
POLE-222	ENST00000545015	SNX29P2	Q8IUI4	249 aa		10.23	□□□□□ -0.77
POLE-222	ENST00000545015	C15orf40	Q8WUR7	153 aa		10.23	□□□□□ -0.77
POLE-222	ENST00000545015	DGCR14	Q96DF8	476 aa	Known RBP	10.23	□□□□□ -0.77
POLE-222	ENST00000545015	BCL7B	Q9BQE9	202 aa		10.23	□□□□□ -0.77
POLE-222	ENST00000545015	RSRP1	Q9BUV0	290 aa		10.23	□□□□□ -0.77
POLE-222	ENST00000545015	TMEM140	Q9NV12	185 aa		10.23	□□□□□ -0.77
POLE-222	ENST00000545015	SMAD5-AS1	Q9Y6J3	95 aa		10.23	□□□□□ -0.77
POLE-222	ENST00000545015	IGLV11-55	A0A075B6I3	123 aa		10.22	□□□□□ -0.77
POLE-222	ENST00000545015	MARCH11	A6NNE9	402 aa		10.22	□□□□□ -0.77
POLE-222	ENST00000545015	RLN1	P04808	185 aa		10.22	□□□□□ -0.77
POLE-222	ENST00000545015	AREG	P15514	252 aa		10.22	□□□□□ -0.77
POLE-222	ENST00000545015	PTBP1	P26599	531 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
POLE-222	ENST00000545015	SYNJ2BP	P57105	145 aa		10.22	□□□□□ -0.77
POLE-222	ENST00000545015	RPEL1	Q2QD12	228 aa		10.22	□□□□□ -0.77
POLE-222	ENST00000545015	C15orf32	Q32M92	178 aa		10.22	□□□□□ -0.77
POLE-222	ENST00000545015	ZNF585B	Q52M93	769 aa		10.22	□□□□□ -0.77
POLE-222	ENST00000545015	C11orf87	Q6NUJ2	197 aa		10.22	□□□□□ -0.77
POLE-222	ENST00000545015	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.22	□□□□□ -0.77
POLE-222	ENST00000545015	HRASLS	Q9HDD0	168 aa		10.22	□□□□□ -0.77
POLE-222	ENST00000545015	TRAV3	A0A0B4J244	114 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015	IGLC7	A0M8Q6	106 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015		A8MZ25	164 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015	OR2J3	O76001	311 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015	LY86	O95711	162 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015	CSN3	P07498	182 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015	TBP	P20226	339 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015	ERVK-16	P61578	105 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015	TSPAN5	P62079	268 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015	DMBX1	Q8NFW5	382 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015	FCAMR	Q8WWV6	532 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015	QTRT1	Q9BXR0	403 aa	Known RBP	10.21	□□□□□ -0.77
POLE-222	ENST00000545015	COMMD5	Q9GZQ3	224 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015	NDUFA13	Q9P0J0	144 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015	MTFP1	Q9UDX5	166 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015	FBXL7	Q9UJT9	491 aa		10.21	□□□□□ -0.77
POLE-222	ENST00000545015	FAM25A	B3EWG3	89 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	FAM25C	B3EWG5	89 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	FAM25G	B3EWG6	89 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015		H0Y980	276 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	LGALS9	O00182	355 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	MYOD1	P15172	320 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	S100G	P29377	79 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	LPAR6	P43657	344 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	TMBIM6	P55061	237 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	C19orf35	Q6ZS72	473 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	LHFPL1	Q86WI0	220 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	SLC38A6	Q8IZM9	456 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015		Q8N1Y9	231 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	ARRDC1	Q8N5I2	433 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	OR2K2	Q8NGT1	345 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	RAB2B	Q8WUD1	216 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	ZNF486	Q96H40	463 aa	Predicted RBP	10.2	□□□□□ -0.78
POLE-222	ENST00000545015	CCDC140	Q96MF4	163 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	ABHD1	Q96SE0	405 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	THAP7	Q9BT49	309 aa	Predicted RBP	10.2	□□□□□ -0.78
POLE-222	ENST00000545015	MIXL1	Q9H2W2	232 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	PEMT	Q9UBM1	199 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	EXTL2	Q9UBQ6	330 aa		10.2	□□□□□ -0.78
POLE-222	ENST00000545015	TRBV7-1	A0A0A6YYK4	115 aa		10.19	□□□□□ -0.78
POLE-222	ENST00000545015	TEX50	A0A1B0GTY4	177 aa		10.19	□□□□□ -0.78
POLE-222	ENST00000545015	GGCT	O75223	188 aa	Known RBP	10.19	□□□□□ -0.78
POLE-222	ENST00000545015	NDUFB8	O95169	186 aa		10.19	□□□□□ -0.78
POLE-222	ENST00000545015	CD74	P04233	296 aa		10.19	□□□□□ -0.78
POLE-222	ENST00000545015	RND3	P61587	244 aa		10.19	□□□□□ -0.78
POLE-222	ENST00000545015	MRPS10	P82664	201 aa	Known RBP	10.19	□□□□□ -0.78
POLE-222	ENST00000545015	SSBP1	Q04837	148 aa	Known RBP	10.19	□□□□□ -0.78
POLE-222	ENST00000545015	SPCS2	Q15005	226 aa		10.19	□□□□□ -0.78
POLE-222	ENST00000545015	GPHB5	Q86YW7	130 aa		10.19	□□□□□ -0.78
POLE-222	ENST00000545015		Q8N402	240 aa		10.19	□□□□□ -0.78
POLE-222	ENST00000545015	OR1L8	Q8NGR8	309 aa		10.19	□□□□□ -0.78
POLE-222	ENST00000545015	OR52I2	Q8NH67	350 aa		10.19	□□□□□ -0.78
POLE-222	ENST00000545015	EEF1AKMT3	Q96AZ1	226 aa		10.19	□□□□□ -0.78
POLE-222	ENST00000545015	CXorf58	Q96LI9	332 aa		10.19	□□□□□ -0.78
POLE-222	ENST00000545015	NDUFA4L2	Q9NRX3	87 aa		10.19	□□□□□ -0.78
POLE-222	ENST00000545015	KLK11	Q9UBX7	282 aa		10.19	□□□□□ -0.78
POLE-222	ENST00000545015	GABARAP	H6UMI1	98 aa		10.18	□□□□□ -0.78
POLE-222	ENST00000545015	KRAS	P01116	189 aa		10.18	□□□□□ -0.78
POLE-222	ENST00000545015	TRAPPC2	P0DI81	140 aa		10.18	□□□□□ -0.78
POLE-222	ENST00000545015	TRAPPC2B	P0DI82	140 aa		10.18	□□□□□ -0.78
POLE-222	ENST00000545015	DEFA4	P12838	97 aa		10.18	□□□□□ -0.78
POLE-222	ENST00000545015	PHLDA2	Q53GA4	152 aa		10.18	□□□□□ -0.78
POLE-222	ENST00000545015	RNASE10	Q5GAN6	216 aa	Known RBP	10.18	□□□□□ -0.78
POLE-222	ENST00000545015	LCN12	Q6JVE5	192 aa		10.18	□□□□□ -0.78
POLE-222	ENST00000545015	TBC1D26	Q86UD7	250 aa		10.18	□□□□□ -0.78
POLE-222	ENST00000545015	GDPD1	Q8N9F7	314 aa		10.18	□□□□□ -0.78
POLE-222	ENST00000545015	TMEM229B	Q8NBD8	167 aa		10.18	□□□□□ -0.78
POLE-222	ENST00000545015	OR5B3	Q8NH48	314 aa		10.18	□□□□□ -0.78
POLE-222	ENST00000545015	DYNC2LI1	Q8TCX1	351 aa		10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms