RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 KRTAP27-1Q3LI81 207 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 C1QL4Q86Z23 238 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 BEND2Q8NDZ0 799 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 HARBI1Q96MB7 349 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 COA4Q9NYJ1 87 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 A8MWL6 223 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 IL18BPO95998 194 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 ARL14EPLP0DKL9 152 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 SFTPCP11686 197 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 MDKP21741 143 aaPredicted RBP4.86□□□□□ -1.63
VPS50-220ENST00000544910 ZNF146Q15072 292 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 RSPO1Q2MKA7 263 aaPredicted RBP4.86□□□□□ -1.63
VPS50-220ENST00000544910 ACSF3Q4G176 576 aaPredicted RBP4.86□□□□□ -1.63
VPS50-220ENST00000544910 RPL39P5Q59GN2 51 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 C10orf113Q5VZT2 155 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 Q6P435 159 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 PCSK4Q6UW60 755 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 RPRMQ9NS64 109 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 PPIAL4EA0A075B759 164 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 DPRXA6NFQ7 191 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 PPIAL4DF5H284 164 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 RAMP3O60896 148 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 PPIAL4FP0DN26 164 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 COL8A1P27658 744 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 COMPP49747 757 aaPredicted RBP4.86□□□□□ -1.63
VPS50-220ENST00000544910 LGALS4P56470 323 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 C10orf91Q5T1B1 145 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 MIC13Q5XKP0 118 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 WDR82Q6UXN9 313 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 VKORC1L1Q8N0U8 176 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 C5orf17Q8NAS9 161 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 C2orf88Q9BSF0 95 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 PPIAL4AQ9Y536 164 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.86□□□□□ -1.63
VPS50-220ENST00000544910 COLCA2A8K830 154 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 NPIPB11E5RHQ5 1161 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 LILRA1O75019 489 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 NDUFB4O95168 129 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 NUTF2P61970 127 aaKnown RBP4.86□□□□□ -1.63
VPS50-220ENST00000544910 JOSD1Q15040 202 aaPredicted RBP4.86□□□□□ -1.63
VPS50-220ENST00000544910 TNXAQ16473 311 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.86□□□□□ -1.63
VPS50-220ENST00000544910 OR8A1Q8NGG7 326 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 OR1B1Q8NGR6 318 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 SSC4DQ8WTU2 575 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 AP5S1Q9NUS5 200 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 ARID1BQ8NFD5 2236 aaPredicted RBP4.86□□□□□ -1.63
VPS50-220ENST00000544910 CD3EP07766 207 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 SMIM13P0DJ93 91 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 MFAP2P55001 183 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 CCL20P78556 96 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 MBNL2Q5VZF2 373 aaKnown RBP4.86□□□□□ -1.63
VPS50-220ENST00000544910 COLCA1Q6ZS62 124 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 OR1L8Q8NGR8 309 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 FAM216AQ8WUB2 273 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 RPEQ96AT9 228 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 NCOR1P1Q9H4R4 102 aa4.86□□□□□ -1.63
VPS50-220ENST00000544910 DLL1O00548 723 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 OR4A8P0C604 315 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 NMUP48645 174 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 TIMM23BQ5SRD1 257 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 Q6ZSR3 168 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 C5orf24Q7Z6I8 188 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 Q8WTZ3 238 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 RND1Q92730 232 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 LEAP2Q969E1 77 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 IGHV1-18A0A0C4DH31 117 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 FBLL1A6NHQ2 334 aaKnown RBP4.85□□□□□ -1.63
VPS50-220ENST00000544910 RBP4P02753 201 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 GCSHP23434 173 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 S100A4P26447 101 aaKnown RBP4.85□□□□□ -1.63
VPS50-220ENST00000544910 GNB4Q9HAV0 340 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 SDF2L1Q9HCN8 221 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 AURKAIP1Q9NWT8 199 aaPredicted RBP4.85□□□□□ -1.63
VPS50-220ENST00000544910 FAM90A27PA6NNH2 459 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 FAM90A9PA6NNJ1 464 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 SLC17A3O00476 420 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 LIPFP07098 398 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 COX6CP09669 75 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 LINC00869P0C866 280 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 UQCRFS1P47985 274 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 HSPE1P61604 102 aaKnown RBP4.85□□□□□ -1.63
VPS50-220ENST00000544910 IBA57Q5T440 356 aaKnown RBP4.85□□□□□ -1.63
VPS50-220ENST00000544910 OR8B3Q8NGG8 313 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 PRR7Q8TB68 274 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 ZNF71Q9NQZ8 489 aaPredicted RBP4.85□□□□□ -1.63
VPS50-220ENST00000544910 ELOVL5Q9NYP7 299 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 HSPB7Q9UBY9 170 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 TCF19Q9Y242 345 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 LAMTOR2Q9Y2Q5 125 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 TP53BP1Q12888 1972 aaPredicted RBP4.85□□□□□ -1.63
VPS50-220ENST00000544910 C10orf142B7Z368 130 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 RPL31P62899 125 aaKnown RBP4.85□□□□□ -1.63
VPS50-220ENST00000544910 OR8B2Q96RD0 313 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 LIME1Q9H400 295 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 VSIRQ9H7M9 311 aa4.85□□□□□ -1.63
VPS50-220ENST00000544910 HEATR5AQ86XA9 2040 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 DLEU1O43261 78 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 ANOS1P23352 680 aa4.84□□□□□ -1.63
VPS50-220ENST00000544910 NTF4P34130 210 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms