RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 FAM53AQ6NSI3 398 aaPredicted RBP10.74□□□□□ -0.69
CPSF7-223ENST00000544669 SLC25A48Q6ZT89 311 aaKnown RBP10.74□□□□□ -0.69
CPSF7-223ENST00000544669 LRP11Q86VZ4 500 aa10.74□□□□□ -0.69
CPSF7-223ENST00000544669 LYG1Q8N1E2 194 aa10.74□□□□□ -0.69
CPSF7-223ENST00000544669 ABHD12Q8N2K0 398 aa10.74□□□□□ -0.69
CPSF7-223ENST00000544669 NECAP1Q8NC96 275 aa10.74□□□□□ -0.69
CPSF7-223ENST00000544669 ZNF439Q8NDP4 499 aa10.74□□□□□ -0.69
CPSF7-223ENST00000544669 OR10G8Q8NGN5 311 aa10.74□□□□□ -0.69
CPSF7-223ENST00000544669 OR4A5Q8NH83 315 aa10.74□□□□□ -0.69
CPSF7-223ENST00000544669 VSTM2AQ8TAG5 236 aa10.74□□□□□ -0.69
CPSF7-223ENST00000544669 NEUROG1Q92886 237 aa10.74□□□□□ -0.69
CPSF7-223ENST00000544669 GCM1Q9NP62 436 aa10.74□□□□□ -0.69
CPSF7-223ENST00000544669 RPUSD1Q9UJJ7 312 aaKnown RBP10.74□□□□□ -0.69
CPSF7-223ENST00000544669 PRUNE2Q8WUY3 3088 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 IGHV3OR15-7A0A075B7D8 119 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 TRBV9A0A0B4J1U6 114 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 J3QR06 171 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 UPK2O00526 184 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 APOA2P02652 100 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 EFNB3Q15768 340 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 MIC13Q5XKP0 118 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 PQLC2Q6ZP29 291 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 STPG3Q8N7X2 389 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 OR1L8Q8NGR8 309 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 GATAD1Q8WUU5 269 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 PATZ1Q9HBE1 687 aaKnown RBP10.73□□□□□ -0.69
CPSF7-223ENST00000544669 TECRQ9NZ01 308 aaKnown RBP10.73□□□□□ -0.69
CPSF7-223ENST00000544669 TRAPPC1Q9Y5R8 145 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 USP34Q70CQ2 3546 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 ZDBF2Q9HCK1 2354 aa10.73□□□□□ -0.69
CPSF7-223ENST00000544669 A0A0U1RQK1 487 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 ZNF320A2RRD8 509 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 NPPCP23582 126 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 GPX4P36969 197 aaPredicted RBP10.72□□□□□ -0.69
CPSF7-223ENST00000544669 PRR20EP86478 221 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 PRR20CP86479 221 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 PRR20DP86480 221 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 PRR20BP86481 221 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 PRR20AP86496 221 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 RTP5Q14D33 572 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 FAM209BQ5JX69 171 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 ASCL5Q7RTU5 278 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 MRPL41Q8IXM3 137 aaKnown RBP10.72□□□□□ -0.69
CPSF7-223ENST00000544669 C8orf31Q8N9H6 132 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 FAM57AQ8TBR7 257 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 SLC35D1Q9NTN3 355 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 A0A1W2PN81 502 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 CA2P00918 260 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 IGHV1-46P01743 117 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 TFF1P04155 84 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 CD40P25942 277 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 CHRNA7P36544 502 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 ATP5G3P48201 142 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 SUB1P53999 127 aaKnown RBP eCLIP10.72□□□□□ -0.69
CPSF7-223ENST00000544669 UBE2G2P60604 165 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 YPEL3P61236 119 aaPredicted RBP10.72□□□□□ -0.69
CPSF7-223ENST00000544669 RPS16P62249 146 aaKnown RBP10.72□□□□□ -0.69
CPSF7-223ENST00000544669 ERHP84090 104 aaKnown RBP10.72□□□□□ -0.69
CPSF7-223ENST00000544669 PDZD11Q5EBL8 140 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 FAM78BQ5VT40 261 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 GFI1BQ5VTD9 330 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 GAFA1Q96PS6 74 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 MRPL32Q9BYC8 188 aaKnown RBP10.72□□□□□ -0.69
CPSF7-223ENST00000544669 PRDM13Q9H4Q3 707 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 FUT9Q9Y231 359 aa10.72□□□□□ -0.69
CPSF7-223ENST00000544669 LINC00205P59089 165 aa10.71□□□□□ -0.69
CPSF7-223ENST00000544669 IQCJQ1A5X6 159 aa10.71□□□□□ -0.69
CPSF7-223ENST00000544669 VHLLQ6RSH7 139 aa10.71□□□□□ -0.69
CPSF7-223ENST00000544669 VKORC1L1Q8N0U8 176 aa10.71□□□□□ -0.69
CPSF7-223ENST00000544669 SGMS2Q8NHU3 365 aa10.71□□□□□ -0.69
CPSF7-223ENST00000544669 TMEM37Q8WXS4 190 aa10.71□□□□□ -0.69
CPSF7-223ENST00000544669 FAM215AQ9Y5M1 114 aa10.71□□□□□ -0.69
CPSF7-223ENST00000544669 KNTC1P50748 2209 aa10.71□□□□□ -0.7
CPSF7-223ENST00000544669 WDR87Q6ZQQ6 2873 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 AMBPP02760 352 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 WT1P19544 449 aaPredicted RBP10.7□□□□□ -0.7
CPSF7-223ENST00000544669 ARSJQ5FYB0 599 aaPredicted RBP10.7□□□□□ -0.7
CPSF7-223ENST00000544669 IL36BQ9NZH7 164 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 TRAV3A0A0B4J244 114 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 MKRN2OSH3BPM6 223 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 OR10J4P0C629 311 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 USF1P22415 310 aaPredicted RBP10.7□□□□□ -0.7
CPSF7-223ENST00000544669 IL3RAP26951 378 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 PAFAH1B2P68402 229 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 MSMPQ1L6U9 139 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 GCSAMLQ5JQS6 135 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 TEX38Q6PEX7 206 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 ZNF833PQ6ZTB9 187 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 TMEM186Q96B77 213 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 COMMD5Q9GZQ3 224 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 NGBQ9NPG2 151 aa10.7□□□□□ -0.7
CPSF7-223ENST00000544669 A0A1W2PRE2 83 aa10.69□□□□□ -0.7
CPSF7-223ENST00000544669 C16orf97H3BN30 126 aa10.69□□□□□ -0.7
CPSF7-223ENST00000544669 PRRG2O14669 202 aa10.69□□□□□ -0.7
CPSF7-223ENST00000544669 SLC31A2O15432 143 aa10.69□□□□□ -0.7
CPSF7-223ENST00000544669 MT-ND6P03923 174 aa10.69□□□□□ -0.7
CPSF7-223ENST00000544669 DDTP30046 118 aa10.69□□□□□ -0.7
CPSF7-223ENST00000544669 RPL15P61313 204 aaKnown RBP10.69□□□□□ -0.7
CPSF7-223ENST00000544669 RPL31P62899 125 aaKnown RBP10.69□□□□□ -0.7
CPSF7-223ENST00000544669 ZNF90Q03938 601 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms