RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	TMEM104	Q8NE00	496 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	IL1F10	Q8WWZ1	152 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	ARPC1A	Q92747	370 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	FGGY	Q96C11	551 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	OPALIN	Q96PE5	141 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	MBOAT4	Q96T53	435 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	ZNF184	Q99676	751 aa	Predicted RBP	4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	THTPA	Q9BU02	230 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	KIF25	Q9UIL4	384 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	IGLV7-46	A0A075B6I9	117 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585		A0A075B6Q4	140 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	CCDC182	A6NF36	153 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	NBR2	O15453	112 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	ORC5	O43913	435 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	CNIH1	O95406	144 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	CST1	P01037	141 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	UBC	P0CG48	685 aa	Known RBP	4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	HOXB6	P17509	224 aa	Known RBP	4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	ZP3	P21754	424 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	CRISP1	P54107	249 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	MMD	Q15546	238 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	PAN3	Q58A45	887 aa	Known RBP	4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	LCE5A	Q5TCM9	118 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	RSBN1	Q5VWQ0	802 aa	Predicted RBP	4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	NXNL2	Q5VZ03	156 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	TMEM236	Q5W0B7	351 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	ZNF660	Q6AZW8	331 aa	Predicted RBP	4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	PLEKHG7	Q6ZR37	379 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	NOTCH2NL	Q7Z3S9	236 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	DHFR2	Q86XF0	187 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	ARL11	Q969Q4	196 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	ZNF251	Q9BRH9	671 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	TTTY10	Q9BZA0	68 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	PRRG3	Q9BZD7	231 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	CST11	Q9H112	138 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	ALX4	Q9H161	411 aa	Predicted RBP	4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	IL36G	Q9NZH8	169 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	MLX	Q9UH92	298 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	SPATA2	Q9UM82	520 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	NUBP2	Q9Y5Y2	271 aa		4.53	□□□□□ -1.68
CPSF7-222	ENST00000544585	IGLV4-3	A0A075B6K6	122 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585		A0A087X002	238 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	IGHV7-81	A0A0B4J1V7	117 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	ZNF736	B4DX44	427 aa	Predicted RBP	4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	SDCBP	O00560	298 aa	Predicted RBP	4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	ISG15	P05161	165 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	RPL13A	P40429	203 aa	Known RBP	4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	ZNF137P	P52743	207 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	CRIP2	P52943	208 aa	Predicted RBP	4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	ACTB	P60709	375 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	C5orf64	Q2M2E5	130 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	TMEM30B	Q3MIR4	351 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	TP53I3	Q53FA7	332 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	AKIRIN2	Q53H80	203 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	MEDAG	Q5VYS4	303 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	LCN12	Q6JVE5	192 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	ZFP1	Q6P2D0	407 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	SLC25A48	Q6ZT89	311 aa	Known RBP	4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	LRRTM1	Q86UE6	522 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	DEFB107A	Q8IZN7	70 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585		Q8N402	240 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	C15orf54	Q8N8G6	183 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	PXT1	Q8NFP0	134 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	NPB	Q8NG41	125 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	OR5D14	Q8NGL3	314 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	OR1L4	Q8NGR5	311 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	OR2K2	Q8NGT1	345 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	TMEM106A	Q96A25	262 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	ADAT3	Q96EY9	351 aa	Predicted RBP	4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	CPNE2	Q96FN4	548 aa	Predicted RBP	4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	TSC22D3	Q99576	134 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	ANKRD60	Q9BZ19	345 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	OCR1	Q9BZK8	76 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585		Q9H521	79 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	SLC2A8	Q9NY64	477 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	SIGLEC8	Q9NYZ4	499 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	WARS2	Q9UGM6	360 aa	Known RBP	4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	GAB2	Q9UQC2	676 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585	DNAH7	Q8WXX0	4024 aa		4.52	□□□□□ -1.69
CPSF7-222	ENST00000544585		A0A0G2JLM5	398 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	LOC107986453	A0A1B0GWG9	222 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	TMEM30CP	A0ZSE6	113 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	NUPR2	A6NF83	97 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	C15orf65	H3BRN8	121 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	PRKY	O43930	277 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	ATP6V1B2	P21281	511 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	SSTR5	P35346	364 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	CAPG	P40121	348 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	RPL8	P62917	257 aa	Known RBP	4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	PTGES3	Q15185	160 aa	Known RBP	4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	KISS1	Q15726	138 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	CT45A1	Q5HYN5	189 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	AADACL4	Q5VUY2	407 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	CD200R1L	Q6Q8B3	271 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	IZUMO2	Q6UXV1	221 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	GID4	Q8IVV7	300 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	LINC01561	Q8N1V8	128 aa		4.51	□□□□□ -1.69
CPSF7-222	ENST00000544585	SUMF2	Q8NBJ7	301 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 107 ms