RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 CEBPZOSA8MTT3 80 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 LEUTXA8MZ59 168 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 H3BS24 57 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 IFNA17P01571 189 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 OR9G9P0C7N8 305 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 SLC25A16P16260 332 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 HTR1DP28221 377 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 DVL1P1P54792 670 aaPredicted RBP8.11□□□□□ -1.11
MDH1-216ENST00000544381 UBE2KP61086 200 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 RPS16P62249 146 aaKnown RBP8.11□□□□□ -1.11
MDH1-216ENST00000544381 PAX2Q02962 417 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 KLRD1Q13241 179 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 POU2AF1Q16633 256 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 PRSS57Q6UWY2 283 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 MOB3BQ86TA1 216 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 ZNF680Q8NEM1 530 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 OR4P4Q8NGL7 312 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 OR4C13Q8NGP0 309 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 CLCC1Q96S66 551 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 SIRPDQ9H106 197 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 RBKSQ9H477 322 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 C11orf1Q9H5F2 150 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 UNKLQ9H9P5 680 aaKnown RBP8.11□□□□□ -1.11
MDH1-216ENST00000544381 LPAR2Q9HBW0 351 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 MMP26Q9NRE1 261 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 LYRM2Q9NU23 88 aaPredicted RBP8.11□□□□□ -1.11
MDH1-216ENST00000544381 PSENENQ9NZ42 101 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 DPM3Q9P2X0 92 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 HSPB7Q9UBY9 170 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 POLR3KQ9Y2Y1 108 aaPredicted RBP8.11□□□□□ -1.11
MDH1-216ENST00000544381 SVEP1Q4LDE5 3571 aa8.11□□□□□ -1.11
MDH1-216ENST00000544381 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.11□□□□□ -1.115e-6■■■■□ 22.7
MDH1-216ENST00000544381 IGHV1-3A0A0C4DH29 117 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 FAM157AC9JC47 383 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 CRLF1O75462 422 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 SPDEFO95238 335 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 IGKV1-16P04430 117 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 IAPPP10997 89 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 LGALS4P56470 323 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 TAS2R30P59541 319 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 OR2B8PP59922 312 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 EIF5AP63241 154 aaKnown RBP8.1□□□□□ -1.11
MDH1-216ENST00000544381 EWSR1Q01844 656 aaKnown RBP eCLIP8.1□□□□□ -1.11
MDH1-216ENST00000544381 EXOSC2Q13868 293 aaKnown RBP8.1□□□□□ -1.11
MDH1-216ENST00000544381 TMEM177Q53S58 311 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 TPTE2P1Q5T6R2 138 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 OR4A47Q6IF82 309 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 STX12Q86Y82 276 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 TMEM252Q8N6L7 170 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 ST8SIA2Q92186 375 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 SMIM8Q96KF7 97 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 HARBI1Q96MB7 349 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 CIB3Q96Q77 187 aaPredicted RBP8.1□□□□□ -1.11
MDH1-216ENST00000544381 QTRT1Q9BXR0 403 aaKnown RBP8.1□□□□□ -1.11
MDH1-216ENST00000544381 SMIM3Q9BZL3 60 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 UBQLN2Q9UHD9 624 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 NUP50Q9UKX7 468 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 PRNDQ9UKY0 176 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 WSB1Q9Y6I7 421 aa8.1□□□□□ -1.11
MDH1-216ENST00000544381 BORCS7-ASMTA0A0B4J1R7 106 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 IGHV3-72A0A0B4J1Y9 119 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 A0A1W2PRD5 423 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 A0A1W2PRF3 423 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 A0A1W2PRM7 423 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 IGSF23A1L1A6 192 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 ODF3BA8MYP8 253 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 LY6LH3BQJ8 138 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 UPK2O00526 184 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 LY86O95711 162 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 CFDP00746 253 aaPredicted RBP8.09□□□□□ -1.11
MDH1-216ENST00000544381 TPT1P13693 172 aaKnown RBP8.09□□□□□ -1.11
MDH1-216ENST00000544381 USF1P22415 310 aaPredicted RBP8.09□□□□□ -1.11
MDH1-216ENST00000544381 PAX9P55771 341 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 SPCS3P61009 180 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 NHLH2Q02577 135 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 BAXQ07812 192 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 VMA21Q3ZAQ7 101 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 HCP5Q6MZN7 132 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 PDZD9Q8IXQ8 264 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 OR8H3Q8N146 312 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 OR52E5Q8NH55 327 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 VSTM2AQ8TAG5 236 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 DTD1Q8TEA8 209 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 MS4A7Q9GZW8 240 aaPredicted RBP8.09□□□□□ -1.11
MDH1-216ENST00000544381 FBXL17Q9UF56 701 aa8.09□□□□□ -1.11
MDH1-216ENST00000544381 TRAV3A0A0B4J244 114 aa8.08□□□□□ -1.12
MDH1-216ENST00000544381 C15orf61A6NNL5 157 aa8.08□□□□□ -1.12
MDH1-216ENST00000544381 SRRM4A7MD48 611 aaKnown RBP8.08□□□□□ -1.12
MDH1-216ENST00000544381 OOSP1A8MZH6 123 aa8.08□□□□□ -1.12
MDH1-216ENST00000544381 RNASEK-C17orf49H0YIS7 233 aa8.08□□□□□ -1.12
MDH1-216ENST00000544381 H3BP45 60 aa8.08□□□□□ -1.12
MDH1-216ENST00000544381 JTBO76095 146 aa8.08□□□□□ -1.12
MDH1-216ENST00000544381 CST7O76096 145 aa8.08□□□□□ -1.12
MDH1-216ENST00000544381 TMEM50AO95807 157 aa8.08□□□□□ -1.12
MDH1-216ENST00000544381 PF4P02776 101 aa8.08□□□□□ -1.12
MDH1-216ENST00000544381 SAA1P0DJI8 122 aaPredicted RBP8.08□□□□□ -1.12
MDH1-216ENST00000544381 LGALS7P47929 136 aa8.08□□□□□ -1.12
MDH1-216ENST00000544381 RAB14P61106 215 aa8.08□□□□□ -1.12
MDH1-216ENST00000544381 RPP30P78346 268 aaKnown RBP8.08□□□□□ -1.12
MDH1-216ENST00000544381 AARDQ4LEZ3 155 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms