RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 EDA2RQ9HAV5 297 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 ELOVL5Q9NYP7 299 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 CEP290O15078 2479 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 PEX11BO96011 259 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 ATXN8Q156A1 80 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 C2orf68Q2NKX9 166 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 SIGMAR1Q99720 223 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 DLL3Q9NYJ7 618 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 GON4LQ3T8J9 2241 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 CROCCQ5TZA2 2017 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 DDX60LQ5H9U9 1706 aaKnown RBP8.88□□□□□ -0.99
PCDH9-204ENST00000544246 S100A7L2Q5SY68 101 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 LEAP2Q969E1 77 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 ST20Q9HBF5 79 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 PEMTQ9UBM1 199 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 RNF115Q9Y4L5 304 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 SPAARA0A1B0GVQ0 90 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 C5orf67F2Z3F1 127 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 CTSSP25774 331 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 GPX4P36969 197 aaPredicted RBP8.87□□□□□ -0.99
PCDH9-204ENST00000544246 GAGE2EQ4V326 116 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 SAXO1Q8IYX7 474 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 GATAD1Q8WUU5 269 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 MEGF9Q9H1U4 602 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 GAGE2DQ9UEU5 116 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 Q6AWC8 147 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 FAM57AQ8TBR7 257 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 ZPLD1Q8TCW7 415 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 AQP3Q92482 292 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 A0A1B0GUT8 65 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 NANOS3P60323 173 aaKnown RBP8.87□□□□□ -0.99
PCDH9-204ENST00000544246 WNT2BQ93097 391 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 NUMA1Q14980 2115 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 EVPLQ92817 2033 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 IGHV3OR16-13A0A075B7E8 117 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 IGHV3-74A0A0B4J1X5 117 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 NAPSAO96009 420 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 FER1L6-AS1Q8NA97 138 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 OR4X2Q8NGF9 303 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 TRAV2A0A0B4J234 112 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 A0A0G2JLM5 398 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 HIST1H4AP62805 103 aaKnown RBP8.87□□□□□ -0.99
PCDH9-204ENST00000544246 TMEM86BQ8N661 226 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 APCDD1LQ8NCL9 501 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 NPCDR1Q9BY65 106 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 MS4A6AQ9H2W1 248 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 CST9LQ9H4G1 147 aa8.87□□□□□ -0.99
PCDH9-204ENST00000544246 IGHV1-69-2A0A0G2JMI3 117 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 DTX2Q86UW9 622 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 PTP4A3O75365 173 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 TOMM40O96008 361 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 ZAR1Q86SH2 424 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 ORMDL3Q8N138 153 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 FNDC4Q9H6D8 234 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-204ENST00000544246 MRPS18AQ9NVS2 196 aaKnown RBP8.86□□□□□ -0.99
PCDH9-204ENST00000544246 IGHV3-35A0A0C4DH35 117 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 A0A0J9YW62 118 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 IL11P20809 199 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 ZNF257Q9Y2Q1 563 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 RPP25Q9BUL9 199 aaKnown RBP8.86□□□□□ -0.99
PCDH9-204ENST00000544246 NRXN2Q9P2S2 1712 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 ADAMTSL1Q8N6G6 1762 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 MUC21A0A0G2JKD1 596 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 MUC21A0A140T8X8 626 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 MPTX1A8MV57 137 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 MUC21Q5SSG8 566 aa8.86□□□□□ -0.99
PCDH9-204ENST00000544246 NHP2Q9NX24 153 aaKnown RBP8.86□□□□□ -0.99
PCDH9-204ENST00000544246 IGHV1-45A0A0A0MS14 117 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 IZUMO1RA6ND01 250 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 A8MWV9 139 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 TMEM187Q14656 261 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 FBXL7Q9UJT9 491 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 HBDP02042 147 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 LGALS1P09382 135 aaKnown RBP8.85□□□□□ -0.99
PCDH9-204ENST00000544246 PTGDSP41222 190 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 ZNF585BQ52M93 769 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 ZNF818PQ6ZRF7 136 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 STHQ8IWL8 128 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 CIARTQ8N365 385 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-204ENST00000544246 IGHV3-49A0A0A0MS15 119 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 F8WEM9 126 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 FOXA2Q9Y261 457 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-204ENST00000544246 TRAV9-1A0A075B6T8 112 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 TRBV5-5A0A0J9YX44 114 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 PRSS23O95084 383 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 IGHV3-48P01763 117 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 NBEAP1P0C6P0 100 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 HOXB1P14653 301 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-204ENST00000544246 RIPPLY3P57055 190 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 TIMM23BQ5SRD1 257 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 PLXNB2O15031 1838 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 DICER1Q9UPY3 1922 aaKnown RBP8.85□□□□□ -0.99
PCDH9-204ENST00000544246 PQLC2LA1A4F0 135 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 DRD3P35462 400 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 UCP3P55916 312 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 IFI27L2Q9H2X8 130 aa8.85□□□□□ -0.99
PCDH9-204ENST00000544246 PROB1E7EW31 1015 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 PLNP26678 52 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 PPP1R27Q86WC6 154 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 SCARF2Q96GP6 870 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms