RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TDGF1P13385 188 aa13.12□□□□□ -0.31
CHD4-210ENST00000544040 TMEM186Q96B77 213 aa13.12□□□□□ -0.31
CHD4-210ENST00000544040 GATA2P23769 480 aaPredicted RBP13.11□□□□□ -0.31
CHD4-210ENST00000544040 CNTFRP26992 372 aa13.11□□□□□ -0.31
CHD4-210ENST00000544040 REPIN1Q9BWE0 567 aaKnown RBP13.11□□□□□ -0.31
CHD4-210ENST00000544040 TRAV21A0A0B4J279 112 aa13.11□□□□□ -0.31
CHD4-210ENST00000544040 C4orf51C9J302 202 aa13.11□□□□□ -0.31
CHD4-210ENST00000544040 RAMP1O60894 148 aa13.11□□□□□ -0.31
CHD4-210ENST00000544040 ZNF362Q5T0B9 420 aaPredicted RBP13.11□□□□□ -0.31
CHD4-210ENST00000544040 SPOCK3Q9BQ16 436 aa13.11□□□□□ -0.31
CHD4-210ENST00000544040 SCN1AP35498 2009 aa13.11□□□□□ -0.31
CHD4-210ENST00000544040 RREB1Q92766 1687 aa13.11□□□□□ -0.31
CHD4-210ENST00000544040 IGHV1-69-2A0A0G2JMI3 117 aa13.11□□□□□ -0.31
CHD4-210ENST00000544040 SCARF2Q96GP6 870 aaPredicted RBP13.11□□□□□ -0.31
CHD4-210ENST00000544040 SSBP4Q9BWG4 385 aaPredicted RBP13.11□□□□□ -0.31
CHD4-210ENST00000544040 TMPRSS3P57727 454 aa13.11□□□□□ -0.31
CHD4-210ENST00000544040 RPP21Q9H633 154 aaKnown RBP13.11□□□□□ -0.31
CHD4-210ENST00000544040 TMEM74BQ9NUR3 256 aa13.11□□□□□ -0.31
CHD4-210ENST00000544040 AHRRA9YTQ3 701 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 CKS1BP61024 79 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 CD200R1LQ6Q8B3 271 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 MIR17HGQ75NE6 70 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 SPRED2Q7Z698 418 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 FBXL15Q9H469 300 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 CTSSP25774 331 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 DOCK2Q92608 1830 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 RBMY1BA6NDE4 496 aaKnown RBP13.1□□□□□ -0.31
CHD4-210ENST00000544040 RBMY1EA6NEQ0 496 aaKnown RBP13.1□□□□□ -0.31
CHD4-210ENST00000544040 ZNF729A6NN14 1252 aaPredicted RBP13.1□□□□□ -0.31
CHD4-210ENST00000544040 RBMY1DP0C7P1 496 aaKnown RBP13.1□□□□□ -0.31
CHD4-210ENST00000544040 RBMY1A1P0DJD3 496 aaKnown RBP13.1□□□□□ -0.31
CHD4-210ENST00000544040 RBMY1CP0DJD4 496 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 DNM1P46Q6ZS02 220 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 PILRAQ9UKJ1 303 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 H3BRM9 83 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 PTGDSP41222 190 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 GLMPQ8WWB7 406 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 NHP2Q9NX24 153 aaKnown RBP13.1□□□□□ -0.31
CHD4-210ENST00000544040 SEMA5BQ9P283 1151 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 ATP5LO75964 103 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 VENTXO95231 258 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 ATP5J2P56134 94 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 FAM201AQ5SY85 155 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 C1QL2Q7Z5L3 287 aa13.1□□□□□ -0.31
CHD4-210ENST00000544040 CA7P43166 264 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 GNG5P63218 68 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 PAX2Q02962 417 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 SAXO1Q8IYX7 474 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 PGPEP1LA6NFU8 196 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 LINC00587B1AMM8 73 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 WISP3O95389 354 aaPredicted RBP13.09□□□□□ -0.31
CHD4-210ENST00000544040 TBX6O95947 436 aaPredicted RBP13.09□□□□□ -0.31
CHD4-210ENST00000544040 ADMP35318 185 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 PRB3Q04118 309 aaPredicted RBP13.09□□□□□ -0.31
CHD4-210ENST00000544040 PSMG3Q9BT73 122 aaPredicted RBP13.09□□□□□ -0.31
CHD4-210ENST00000544040 SFXN3Q9BWM7 321 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 A0A1B0GUT8 65 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 OR5P3Q8WZ94 311 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 RNASE7Q9H1E1 156 aaKnown RBP13.09□□□□□ -0.31
CHD4-210ENST00000544040 TUBA4BQ9H853 241 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 SRP19P09132 144 aaKnown RBP13.09□□□□□ -0.31
CHD4-210ENST00000544040 GPX4P36969 197 aaPredicted RBP13.09□□□□□ -0.31
CHD4-210ENST00000544040 ATRAIDQ6UW56 229 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 UNQ9370/PRO34162Q6UXP9 181 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 CCL19Q99731 98 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 IFI27L2Q9H2X8 130 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 ZNF646O15015 1829 aaPredicted RBP13.09□□□□□ -0.31
CHD4-210ENST00000544040 IGKV1D-42A0A075B6H8 117 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 GATAD1Q8WUU5 269 aa13.09□□□□□ -0.31
CHD4-210ENST00000544040 NDUFA2O43678 99 aa13.08□□□□□ -0.31
CHD4-210ENST00000544040 LINC01560Q8TB33 94 aa13.08□□□□□ -0.31
CHD4-210ENST00000544040 FBLIM1Q8WUP2 373 aa13.08□□□□□ -0.31
CHD4-210ENST00000544040 ANAPC13Q9BS18 74 aa13.08□□□□□ -0.31
CHD4-210ENST00000544040 TMEM14DPA8MWL7 114 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 SERF1AO75920 110 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 RNF115Q9Y4L5 304 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 LOC390937A0A1W2PQ73 354 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 A0A1W2PRX2 142 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 C17orf98A8MV24 154 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 CLEC19AQ6UXS0 136 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 PKD1L3Q7Z443 1732 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 H7C1H1 209 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 IGKV1D-33P01593 117 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 IGKV1-33P01594 117 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 CFAP161Q6P656 301 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 FMC1Q96HJ9 113 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 JMJD8Q96S16 334 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 LINC01587Q99440 93 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 FBXL7Q9UJT9 491 aa13.08□□□□□ -0.32
CHD4-210ENST00000544040 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.08□□□□□ -0.32
CHD4-210ENST00000544040 HIGD1CA8MV81 97 aa13.07□□□□□ -0.32
CHD4-210ENST00000544040 TSPAN7P41732 249 aa13.07□□□□□ -0.32
CHD4-210ENST00000544040 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.07□□□□□ -0.32
CHD4-210ENST00000544040 LOC105371267A0A1B0GV96 52 aa13.07□□□□□ -0.32
CHD4-210ENST00000544040 FGF5P12034 268 aa13.07□□□□□ -0.32
CHD4-210ENST00000544040 FER1L6-AS1Q8NA97 138 aa13.07□□□□□ -0.32
CHD4-210ENST00000544040 CD8AP01732 235 aa13.07□□□□□ -0.32
CHD4-210ENST00000544040 UCP3P55916 312 aa13.07□□□□□ -0.32
CHD4-210ENST00000544040 LRTM2Q8N967 370 aa13.07□□□□□ -0.32
CHD4-210ENST00000544040 OR52E5Q8NH55 327 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms