RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 PPP1CBP62140 327 aa7.46□□□□□ -1.22
VPS13D-212ENST00000543766 MS4A13Q5J8X5 152 aa7.46□□□□□ -1.22
VPS13D-212ENST00000543766 GAGE2AQ6NT46 116 aa7.46□□□□□ -1.22
VPS13D-212ENST00000543766 TRIM40Q6P9F5 258 aa7.46□□□□□ -1.22
VPS13D-212ENST00000543766 TMEM99Q8N816 258 aa7.46□□□□□ -1.22
VPS13D-212ENST00000543766 OR4C16Q8NGL9 310 aa7.46□□□□□ -1.22
VPS13D-212ENST00000543766 RPP25Q9BUL9 199 aaKnown RBP7.46□□□□□ -1.22
VPS13D-212ENST00000543766 A0A1W2PPV9 198 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 TLCD2A6NGC4 264 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 SPRY3O43610 288 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 SERF1AO75920 110 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 CR2P20023 1033 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 CA7P43166 264 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 FBXL22Q6P050 247 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 C16orf82Q7Z2V1 217 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 Q8TCH9 128 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 TMEM121BQ9BXQ6 578 aaPredicted RBP7.45□□□□□ -1.22
VPS13D-212ENST00000543766 GTSCR1Q86UQ5 136 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 GATD1Q8NB37 220 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 C11orf45Q8TAV5 145 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 SMIM14Q96QK8 99 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 VN1R3Q9BXE9 311 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 POLR1DQ9Y2S0 133 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 HEATR5AQ86XA9 2040 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 LOC102723971A0A1B0GUV8 181 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 CRYBB3P26998 211 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 LHX2P50458 406 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 SAMD5Q5TGI4 173 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 ACP7Q6ZNF0 438 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 Q6ZT83 130 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 TMEM54Q969K7 222 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 TMEM59Q9BXS4 323 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 STARD5Q9NSY2 213 aa7.45□□□□□ -1.22
VPS13D-212ENST00000543766 BORCS7-ASMTA0A0B4J1R7 106 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 TRBV5-4A0A0C4DH59 114 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 H2BFMP0C1H6 154 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 TAS2R46P59540 309 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 ZNF85Q03923 595 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 HSPB3Q12988 150 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 COA6Q5JTJ3 125 aaKnown RBP7.44□□□□□ -1.22
VPS13D-212ENST00000543766 IBA57Q5T440 356 aaKnown RBP7.44□□□□□ -1.22
VPS13D-212ENST00000543766 OR2T10Q8NGZ9 312 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 MS4A6EQ96DS6 147 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 SYNPO2LQ9H987 977 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 PLA2G2EQ9NZK7 142 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 KLHDC2Q9Y2U9 406 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 INSL5Q9Y5Q6 135 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 SCN5AQ14524 2016 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 HSPB6O14558 160 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 CD40P25942 277 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 TAS2R45P59539 299 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 CCL14Q16627 93 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 UFSP1Q6NVU6 142 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 PARM1Q6UWI2 310 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 BPIFA4PQ86YQ2 179 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 RND1Q92730 232 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 CDH20Q9HBT6 801 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 TDRD6O60522 2096 aaKnown RBP7.44□□□□□ -1.22
VPS13D-212ENST00000543766 MED12LQ86YW9 2145 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 TMEM262E9PQX1 116 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 H0Y8X5 98 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 CYBAP13498 195 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 CCL23P55773 120 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 TMEM147Q9BVK8 224 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 EHFQ9NZC4 300 aa7.44□□□□□ -1.22
VPS13D-212ENST00000543766 GPR183P32249 361 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 DDIT4LQ96D03 193 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 TAAR3PQ9P1P4 343 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 CKLFQ9UBR5 152 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 CD207Q9UJ71 328 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 DOCK6Q96HP0 2047 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 SIRPB1O00241 398 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 PIN1P1O15428 100 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 KLRD1Q13241 179 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 TRPT1Q86TN4 253 aaKnown RBP7.43□□□□□ -1.22
VPS13D-212ENST00000543766 SPIN2AQ99865 258 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 SPIN2BQ9BPZ2 258 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 SSBP3Q9BWW4 388 aaPredicted RBP7.43□□□□□ -1.22
VPS13D-212ENST00000543766 PRSS22Q9GZN4 317 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 TMEM222Q9H0R3 208 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 ZNF665Q9H7R5 613 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 SPANXB1Q9NS25 103 aaPredicted RBP7.43□□□□□ -1.22
VPS13D-212ENST00000543766 C21orf62Q9NYP8 219 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 TRBV24-1A0A075B6N3 115 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 TMSB15BA0A087X1C1 80 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 MYBPHLA2RUH7 354 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 H3BP45 60 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 CD55P08174 381 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 IGFBP6P24592 240 aaPredicted RBP7.43□□□□□ -1.22
VPS13D-212ENST00000543766 CFPP27918 469 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 GRNP28799 593 aaKnown RBP7.43□□□□□ -1.22
VPS13D-212ENST00000543766 ZIC1Q15915 447 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 LINC00596Q86U02 117 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 SCAMP4Q969E2 229 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 SNRNP40Q96DI7 357 aaKnown RBP7.43□□□□□ -1.22
VPS13D-212ENST00000543766 NEURL3Q96EH8 262 aa7.43□□□□□ -1.22
VPS13D-212ENST00000543766 A0A0B4J2E0 115 aa7.42□□□□□ -1.22
VPS13D-212ENST00000543766 A0A1B0GX12 115 aa7.42□□□□□ -1.22
VPS13D-212ENST00000543766 A0A1W2PPM0 123 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms