RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 VSTM5A8MXK1 200 aa14.58□□□□□ -0.08
PTPN6-222ENST00000543744 C11orf94C9JXX5 98 aa14.58□□□□□ -0.08
PTPN6-222ENST00000543744 SMIM6P0DI80 62 aa14.58□□□□□ -0.08
PTPN6-222ENST00000543744 RPL31P62899 125 aaKnown RBP14.58□□□□□ -0.08
PTPN6-222ENST00000543744 FOXC1Q12948 553 aa14.58□□□□□ -0.08
PTPN6-222ENST00000543744 OR10A7Q8NGE5 316 aa14.58□□□□□ -0.08
PTPN6-222ENST00000543744 OR13D1Q8NGV5 346 aa14.58□□□□□ -0.08
PTPN6-222ENST00000543744 SSX3Q99909 188 aa14.58□□□□□ -0.08
PTPN6-222ENST00000543744 GGTLC1Q9BX51 225 aa14.58□□□□□ -0.08
PTPN6-222ENST00000543744 HINT2Q9BX68 163 aa14.58□□□□□ -0.08
PTPN6-222ENST00000543744 SLC35D1Q9NTN3 355 aa14.58□□□□□ -0.08
PTPN6-222ENST00000543744 RPL23P62829 140 aaKnown RBP14.57□□□□□ -0.08
PTPN6-222ENST00000543744 MIC13Q5XKP0 118 aa14.57□□□□□ -0.08
PTPN6-222ENST00000543744 KCNIP2Q9NS61 270 aa14.57□□□□□ -0.08
PTPN6-222ENST00000543744 ZNRD1Q9P1U0 126 aa14.57□□□□□ -0.08
PTPN6-222ENST00000543744 ACACAQ13085 2346 aa14.57□□□□□ -0.08
PTPN6-222ENST00000543744 PPIAL4EA0A075B759 164 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 PPIAL4DF5H284 164 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 CA2P00918 260 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 IGKV1-16P04430 117 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 PPIAL4FP0DN26 164 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 ASCL5Q7RTU5 278 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 LSM4Q9Y4Z0 139 aaKnown RBP14.56□□□□□ -0.08
PTPN6-222ENST00000543744 PPIAL4AQ9Y536 164 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 TMEM178BH3BS89 294 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 APC2O95996 2303 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 TRGC2P03986 189 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 MYOD1P15172 320 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 ARSJQ5FYB0 599 aaPredicted RBP14.56□□□□□ -0.08
PTPN6-222ENST00000543744 NCMAPQ5T1S8 102 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 TEPPQ6URK8 271 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 CCL17Q92583 94 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 ZNF257Q9Y2Q1 563 aa14.56□□□□□ -0.08
PTPN6-222ENST00000543744 TET2Q6N021 2002 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-222ENST00000543744 TRBV24-1A0A075B6N3 115 aa14.55□□□□□ -0.08
PTPN6-222ENST00000543744 J3QR06 171 aa14.55□□□□□ -0.08
PTPN6-222ENST00000543744 UPK2O00526 184 aa14.55□□□□□ -0.08
PTPN6-222ENST00000543744 TGOLN2O43493 480 aa14.55□□□□□ -0.08
PTPN6-222ENST00000543744 PDE6DO43924 150 aa14.55□□□□□ -0.08
PTPN6-222ENST00000543744 IL6RP08887 468 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-222ENST00000543744 NDUFA6P56556 154 aa14.55□□□□□ -0.08
PTPN6-222ENST00000543744 PRR30Q53SZ7 412 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-222ENST00000543744 C16orf82Q7Z2V1 217 aa14.55□□□□□ -0.08
PTPN6-222ENST00000543744 ZNF714Q96N38 554 aa14.55□□□□□ -0.08
PTPN6-222ENST00000543744 LRFN3Q9BTN0 628 aa14.55□□□□□ -0.08
PTPN6-222ENST00000543744 PLEKHA3Q9HB20 300 aa14.55□□□□□ -0.08
PTPN6-222ENST00000543744 PIEZO2Q9H5I5 2752 aa14.55□□□□□ -0.08
PTPN6-222ENST00000543744 HOXA5P20719 270 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 UBE2G2P60604 165 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 RAB31Q13636 194 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 CST9LP1Q5W188 147 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 ZNF833PQ6ZTB9 187 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 SLC16A13Q7RTY0 426 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 ZGRF1Q86YA3 2104 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 SSMEM1Q8WWF3 244 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 C1orf159Q96HA4 380 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 WFIKKN1Q96NZ8 548 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 NGBQ9NPG2 151 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 DOK5Q9P104 306 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 BSNQ9UPA5 3926 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 SRRM4A7MD48 611 aaKnown RBP14.54□□□□□ -0.08
PTPN6-222ENST00000543744 HIST1H2BKO60814 126 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 HIST1H2BJP06899 126 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 CCL3L1P16619 93 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 HIST1H2BOP23527 126 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 HIST1H2BBP33778 126 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 HIST1H2BDP58876 126 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 HIST1H2BCP62807 126 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 PRCDQ00LT1 54 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 HIST2H2BEQ16778 126 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.54□□□□□ -0.08
PTPN6-222ENST00000543744 TMEM200BQ69YZ2 307 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 RND1Q92730 232 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 HIST1H2BHQ93079 126 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 HIST1H2BNQ99877 126 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 HIST1H2BMQ99879 126 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 TMEM106BQ9NUM4 274 aa14.54□□□□□ -0.08
PTPN6-222ENST00000543744 H7BYZ3 331 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 CLN5O75503 358 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 VENTXO95231 258 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 CXorf1O96002 111 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 STAG3L2P0CL84 134 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 STAG3L3P0CL85 134 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 ARL14EPLP0DKL9 152 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 B2MP61769 119 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 RBPJQ06330 500 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 NANPQ8TBE9 248 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 ATMQ13315 3056 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 K7ENP7 123 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 NDUFB3O43676 98 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 NPPCP23582 126 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 SPNS3Q6ZMD2 512 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 ABHD5Q8WTS1 349 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 H1FXQ92522 213 aaKnown RBP14.53□□□□□ -0.08
PTPN6-222ENST00000543744 RNASE6Q93091 150 aaKnown RBP14.53□□□□□ -0.08
PTPN6-222ENST00000543744 MRPL20Q9BYC9 149 aaKnown RBP14.53□□□□□ -0.08
PTPN6-222ENST00000543744 FKBP11Q9NYL4 201 aa14.53□□□□□ -0.08
PTPN6-222ENST00000543744 SPTBN2O15020 2390 aa14.52□□□□□ -0.08
PTPN6-222ENST00000543744 FCN3O75636 299 aa14.52□□□□□ -0.09
PTPN6-222ENST00000543744 APOA2P02652 100 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms