RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 HILPDAQ9Y5L2 63 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 ZFHX4Q86UP3 3567 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 UBE2L5PA0A1B0GUS4 154 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 SLC22A20A6NK97 555 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 KLRC4-KLRK1H3BQV0 150 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 ISLRO14498 428 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 GDF1P27539 372 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 SSTR5P35346 364 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 DSCR4P56555 118 aaPredicted RBP9.5□□□□□ -0.89
CDH4-201ENST00000543233 Q0VFX4 171 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 TMEM249Q2WGJ8 235 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 CD300EQ496F6 205 aaPredicted RBP9.5□□□□□ -0.89
CDH4-201ENST00000543233 PRR31Q5SQ13 230 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 SPATA31B1PQ5VZV4 182 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 PET117Q6UWS5 81 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 NEGR1Q7Z3B1 354 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.5□□□□□ -0.89
CDH4-201ENST00000543233 ZNF114Q8NC26 417 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 QTRT1Q9BXR0 403 aaKnown RBP9.5□□□□□ -0.89
CDH4-201ENST00000543233 LIME1Q9H400 295 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 LOXL2Q9Y4K0 774 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 PRR14LQ5THK1 2151 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 MUC6Q6W4X9 2439 aa9.5□□□□□ -0.89
CDH4-201ENST00000543233 OR4C46A6NHA9 309 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 LINC00696Q6ZRV3 163 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 LYPD6Q86Y78 171 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 GJC3Q8NFK1 279 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 OR10AG1Q8NH19 301 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 JMJD8Q96S16 334 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 ANAPC10Q9UM13 185 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 IGLV3-32A0A0A0MS00 114 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 NPIPB13A6NJU9 1138 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 NPIPB4C9JG80 1138 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 K7EP34 96 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 SIVA1O15304 175 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 NEURL1O76050 574 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 ID1P41134 155 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 DCAF12Q5T6F0 453 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 DOK3Q7L591 496 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 CCDC71LQ8N9Z2 235 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 OR5A2Q8NGI9 324 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 RNF138Q8WVD3 245 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 ST20Q9HBF5 79 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 CLCF1Q9UBD9 225 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 COL5A1P20908 1838 aaPredicted RBP9.49□□□□□ -0.89
CDH4-201ENST00000543233 J3QR89 54 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 DEFA4P12838 97 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 CCL2P13500 99 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 HTR1DP28221 377 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 UBE2G1P62253 170 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 RNASEKQ6P5S7 137 aaKnown RBP9.49□□□□□ -0.89
CDH4-201ENST00000543233 WDR5BQ86VZ2 330 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 DEPPQ9NTK1 212 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 ANXA10Q9UJ72 324 aa9.49□□□□□ -0.89
CDH4-201ENST00000543233 PCNX2A6NKB5 2137 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 LOC102723996A0A087X1L8 192 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 A0A096LPE4 126 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 A0A1W2PPZ6 126 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 PINLYPA6NC86 204 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 NTN3O00634 580 aaPredicted RBP9.48□□□□□ -0.89
CDH4-201ENST00000543233 FTH1P19P0C7X4 201 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 SLC25A6P12236 298 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 TCL1AP56279 114 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 AAED1Q7RTV5 226 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 PPP1R32Q7Z5V6 425 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 TSKUQ8WUA8 353 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 NECAP2Q9NVZ3 263 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 NAPSAO96009 420 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 AESQ08117 197 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 RSPO1Q2MKA7 263 aaPredicted RBP9.48□□□□□ -0.89
CDH4-201ENST00000543233 NRN1LQ496H8 165 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 TCTEX1D4Q5JR98 221 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 UFSP1Q6NVU6 142 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 SLC23A3Q6PIS1 610 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 ODF3L1Q8IXM7 274 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 PSG8Q9UQ74 426 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 MED12LQ86YW9 2145 aa9.48□□□□□ -0.89
CDH4-201ENST00000543233 C3orf85A0A1B0GTC6 90 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 J3QR06 171 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 CA1P00915 261 aaPredicted RBP9.47□□□□□ -0.89
CDH4-201ENST00000543233 CRYGCP07315 174 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 ZNF32P17041 273 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 GPM6AP51674 278 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 GRB2P62993 217 aaKnown RBP9.47□□□□□ -0.89
CDH4-201ENST00000543233 CEACAM16Q2WEN9 425 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 OR10D3Q8NH80 312 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 FGFBP3Q8TAT2 258 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 C1orf147Q96MC9 270 aaPredicted RBP9.47□□□□□ -0.89
CDH4-201ENST00000543233 R4GN57 208 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 B5MCH6 92 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 SMIM17P0DL12 118 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 HIST1H1EP10412 219 aaKnown RBP9.47□□□□□ -0.89
CDH4-201ENST00000543233 IGFBP2P18065 325 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 C3AR1Q16581 482 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 MRPL54Q6P161 138 aaKnown RBP9.47□□□□□ -0.89
CDH4-201ENST00000543233 RPP25LQ8N5L8 163 aaKnown RBP9.47□□□□□ -0.89
CDH4-201ENST00000543233 SSC4DQ8WTU2 575 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 APOBEC3DQ96AK3 386 aaPredicted RBP9.47□□□□□ -0.89
CDH4-201ENST00000543233 KCNIP1Q9NZI2 227 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 VDAC1P21796 283 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms