RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 TIMD4Q96H15 378 aa13.96□□□□□ -0.17
TMEM50B-210ENST00000542230 EIF5A2Q9GZV4 153 aaKnown RBP13.96□□□□□ -0.17
TMEM50B-210ENST00000542230 TEX50A0A1B0GTY4 177 aa13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 APOA2P02652 100 aa13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 FGF7P21781 194 aa13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 PPT1P50897 306 aa13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 DVL1P1P54792 670 aaPredicted RBP13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 FGF8P55075 233 aaPredicted RBP13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 RAB2AP61019 212 aa13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 GNB2P62879 340 aa13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 C10orf55Q5SWW7 151 aa13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 ETV3LQ6ZN32 361 aa13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 PUSL1Q8N0Z8 303 aaKnown RBP13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 PNKDQ8N490 385 aa13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 C8orf31Q8N9H6 132 aa13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 RAB39BQ96DA2 213 aa13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 TMEM147Q9BVK8 224 aa13.96□□□□□ -0.18
TMEM50B-210ENST00000542230 PRSS46E5RG02 174 aa13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 HMGB3O15347 200 aaKnown RBP13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 ZFP36P26651 326 aaKnown RBP13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 CNTFRP26992 372 aa13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 ZNF137PP52743 207 aa13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 LCN15Q6UWW0 184 aa13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 LY6G5BQ8NDX9 201 aa13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 HIPK2Q9H2X6 1198 aa13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 FBN2P35556 2912 aa13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 A0A1W2PRD5 423 aa13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 A0A1W2PRF3 423 aa13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 A0A1W2PRM7 423 aa13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 ENSAO43768 121 aaKnown RBP13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 KBTBD11O94819 623 aa13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 IGLV2-23P01705 113 aa13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 KLRD1Q13241 179 aa13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 HLA-DRB5Q30154 266 aa13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 PATZ1Q9HBE1 687 aaKnown RBP13.95□□□□□ -0.18
TMEM50B-210ENST00000542230 SMCO3A2RU48 225 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 CA2P00918 260 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 OR8U8P0C7N1 319 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 HAGHQ16775 308 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 TMEM177Q53S58 311 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 C10orf91Q5T1B1 145 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 DHRS7BQ6IAN0 325 aaPredicted RBP13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 MOB3BQ86TA1 216 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 RPP25LQ8N5L8 163 aaKnown RBP13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 OR4P4Q8NGL7 312 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 C8orf46Q8TAG6 207 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 PINX1Q96BK5 328 aaKnown RBP13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 C1orf159Q96HA4 380 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 CHD6Q8TD26 2715 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 BUB1B-PAK6H3BSN5 160 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 IFNA4P05014 189 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 FBP1P09467 338 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 MDKP21741 143 aaPredicted RBP13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 GCSAMLQ5JQS6 135 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 OSR1Q8TAX0 266 aaPredicted RBP13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 RCC1LQ96I51 464 aaKnown RBP13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 AIFM2Q9BRQ8 373 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 SSBP3Q9BWW4 388 aaPredicted RBP13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 CLEC7AQ9BXN2 247 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 NPCDR1Q9BY65 106 aa13.94□□□□□ -0.18
TMEM50B-210ENST00000542230 FAM74A7A6NL05 159 aa13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 GPR6P46095 362 aaPredicted RBP13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 VWC2Q2TAL6 325 aa13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 FAM74A3Q4VXF1 159 aa13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 PSMG3Q9BT73 122 aaPredicted RBP13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 BET1LQ9NYM9 111 aa13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 A0A1B0GW64 132 aa13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 SLC25A17O43808 307 aa13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 LIPFP07098 398 aa13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 CD1BP29016 333 aa13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 MLANAQ16655 118 aa13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 MRGPRG-AS1Q2M3A8 158 aa13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 OR4C13Q8NGP0 309 aa13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 PRNDQ9UKY0 176 aa13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 WASHC3Q9Y3C0 194 aa13.93□□□□□ -0.18
TMEM50B-210ENST00000542230 LOC105371242A0A075B767 164 aa13.92□□□□□ -0.18
TMEM50B-210ENST00000542230 CGB1A6NKQ9 187 aa13.92□□□□□ -0.18
TMEM50B-210ENST00000542230 NPBWR1P48145 328 aa13.92□□□□□ -0.18
TMEM50B-210ENST00000542230 ATP6V1FQ16864 119 aa13.92□□□□□ -0.18
TMEM50B-210ENST00000542230 SLC24A4Q8NFF2 622 aa13.92□□□□□ -0.18
TMEM50B-210ENST00000542230 CLCC1Q96S66 551 aa13.92□□□□□ -0.18
TMEM50B-210ENST00000542230 PRCDQ00LT1 54 aa13.91□□□□□ -0.18
TMEM50B-210ENST00000542230 ARSJQ5FYB0 599 aaPredicted RBP13.91□□□□□ -0.18
TMEM50B-210ENST00000542230 TREML4Q6UXN2 200 aa13.91□□□□□ -0.18
TMEM50B-210ENST00000542230 PARD6GQ9BYG4 376 aaPredicted RBP13.91□□□□□ -0.18
TMEM50B-210ENST00000542230 ZNF430Q9H8G1 570 aaPredicted RBP13.91□□□□□ -0.18
TMEM50B-210ENST00000542230 CARHSP1Q9Y2V2 147 aaKnown RBP13.91□□□□□ -0.18
TMEM50B-210ENST00000542230 IGHV1-3A0A0C4DH29 117 aa13.91□□□□□ -0.18
TMEM50B-210ENST00000542230 OR13C7P0DN81 318 aa13.91□□□□□ -0.18
TMEM50B-210ENST00000542230 NPY1RP25929 384 aa13.91□□□□□ -0.18
TMEM50B-210ENST00000542230 FBLN7Q53RD9 439 aa13.91□□□□□ -0.18
TMEM50B-210ENST00000542230 LHFPL4Q7Z7J7 247 aa13.91□□□□□ -0.18
TMEM50B-210ENST00000542230 PDPNQ86YL7 162 aa13.91□□□□□ -0.18
TMEM50B-210ENST00000542230 SEC11CQ9BY50 192 aa13.91□□□□□ -0.18
TMEM50B-210ENST00000542230 ABCA2Q9BZC7 2435 aa13.91□□□□□ -0.18
TMEM50B-210ENST00000542230 CD24P25063 80 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 EFNA4P52798 201 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 PRRX1P54821 245 aa13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 RPL8P62917 257 aaKnown RBP13.9□□□□□ -0.18
TMEM50B-210ENST00000542230 SERF2P84101 59 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms