RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 IGKV3D-15A0A087WSY6 115 aa12.18□□□□□ -0.46
GCFC2-211ENST00000541687 GRIFINA4D1Z8 144 aa12.18□□□□□ -0.46
GCFC2-211ENST00000541687 NMSQ5H8A3 153 aa12.18□□□□□ -0.46
GCFC2-211ENST00000541687 SLC35E4Q6ICL7 350 aa12.18□□□□□ -0.46
GCFC2-211ENST00000541687 SLC25A10Q9UBX3 287 aaPredicted RBP12.18□□□□□ -0.46
GCFC2-211ENST00000541687 PRNDQ9UKY0 176 aa12.18□□□□□ -0.46
GCFC2-211ENST00000541687 DIRC3C9JPN6 131 aa12.18□□□□□ -0.46
GCFC2-211ENST00000541687 OR4X1Q8NH49 305 aa12.18□□□□□ -0.46
GCFC2-211ENST00000541687 MRPS18CQ9Y3D5 142 aaKnown RBP12.18□□□□□ -0.46
GCFC2-211ENST00000541687 IGKV1-6A0A0C4DH72 117 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 CXCL1P09341 107 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 SMIM17P0DL12 118 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 ATP5G3P48201 142 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 PDPNQ86YL7 162 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 TGIF2LYQ8IUE0 185 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 PGPEP1LA6NFU8 196 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 RPL7P18124 248 aaKnown RBP12.17□□□□□ -0.46
GCFC2-211ENST00000541687 FAM27E3Q08E93 113 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 FXYD3Q14802 87 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 FOXL2NBQ6ZUU3 175 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 C5orf17Q8NAS9 161 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 DCAF16Q9NXF7 216 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 AHRRA9YTQ3 701 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 J3KRW8 73 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 IGKV1-5P01602 117 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 LYL1P12980 280 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 AGAP20933 346 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 SRSF6Q13247 344 aaKnown RBP12.17□□□□□ -0.46
GCFC2-211ENST00000541687 KIAA1644Q3SXP7 199 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 GFI1BQ5VTD9 330 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 CYB5R2Q6BCY4 276 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 HCP5Q6MZN7 132 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 FAM53AQ6NSI3 398 aaPredicted RBP12.17□□□□□ -0.46
GCFC2-211ENST00000541687 ZNF497Q6ZNH5 498 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 ZCCHC24Q8N2G6 241 aaKnown RBP12.17□□□□□ -0.46
GCFC2-211ENST00000541687 TMEM167BQ9NRX6 74 aa12.17□□□□□ -0.46
GCFC2-211ENST00000541687 C1QTNF9BB2RNN3 333 aa12.16□□□□□ -0.46
GCFC2-211ENST00000541687 TMEM50AO95807 157 aa12.16□□□□□ -0.46
GCFC2-211ENST00000541687 FOXF2Q12947 444 aa12.16□□□□□ -0.46
GCFC2-211ENST00000541687 OR1P1Q8NH06 330 aa12.16□□□□□ -0.46
GCFC2-211ENST00000541687 SPSB4Q96A44 273 aa12.16□□□□□ -0.46
GCFC2-211ENST00000541687 UFC1Q9Y3C8 167 aa12.16□□□□□ -0.46
GCFC2-211ENST00000541687 ZNF503-AS2A6NEH8 195 aa12.16□□□□□ -0.46
GCFC2-211ENST00000541687 C16orf97H3BN30 126 aa12.16□□□□□ -0.46
GCFC2-211ENST00000541687 A0A1W2PN81 502 aa12.16□□□□□ -0.46
GCFC2-211ENST00000541687 RRHO14718 337 aa12.16□□□□□ -0.46
GCFC2-211ENST00000541687 RPLP1P05386 114 aaKnown RBP12.16□□□□□ -0.46
GCFC2-211ENST00000541687 RPL30P62888 115 aaKnown RBP12.16□□□□□ -0.46
GCFC2-211ENST00000541687 LILRB1Q8NHL6 650 aaPredicted RBP12.16□□□□□ -0.46
GCFC2-211ENST00000541687 SEBOXQ9HB31 216 aaPredicted RBP12.16□□□□□ -0.46
GCFC2-211ENST00000541687 CIDEAO60543 219 aa12.15□□□□□ -0.46
GCFC2-211ENST00000541687 SELLP14151 372 aa12.15□□□□□ -0.46
GCFC2-211ENST00000541687 GATA2P23769 480 aaPredicted RBP12.15□□□□□ -0.46
GCFC2-211ENST00000541687 DTX1Q86Y01 620 aa12.15□□□□□ -0.46
GCFC2-211ENST00000541687 OR8I2Q8N0Y5 310 aa12.15□□□□□ -0.46
GCFC2-211ENST00000541687 FAM216BQ8N7L0 139 aa12.15□□□□□ -0.46
GCFC2-211ENST00000541687 RPL13AP40429 203 aaKnown RBP12.15□□□□□ -0.46
GCFC2-211ENST00000541687 LYPD6Q86Y78 171 aa12.15□□□□□ -0.46
GCFC2-211ENST00000541687 SDF2L1Q9HCN8 221 aa12.15□□□□□ -0.46
GCFC2-211ENST00000541687 METRNQ9UJH8 293 aa12.15□□□□□ -0.46
GCFC2-211ENST00000541687 USF3Q68DE3 2245 aa12.15□□□□□ -0.46
GCFC2-211ENST00000541687 IGHV2OR16-5A0A0B4J2B6 119 aa12.15□□□□□ -0.46
GCFC2-211ENST00000541687 REG1AP05451 166 aa12.15□□□□□ -0.46
GCFC2-211ENST00000541687 CRYBB3P26998 211 aa12.15□□□□□ -0.46
GCFC2-211ENST00000541687 ERVFRD-1P60508 538 aa12.15□□□□□ -0.46
GCFC2-211ENST00000541687 OR8A1Q8NGG7 326 aa12.15□□□□□ -0.46
GCFC2-211ENST00000541687 WNK1Q9H4A3 2382 aa12.15□□□□□ -0.47
GCFC2-211ENST00000541687 H3BTX0 84 aa12.15□□□□□ -0.47
GCFC2-211ENST00000541687 P01737 135 aa12.15□□□□□ -0.47
GCFC2-211ENST00000541687 DDTP30046 118 aa12.15□□□□□ -0.47
GCFC2-211ENST00000541687 HSPE1P61604 102 aaKnown RBP12.15□□□□□ -0.47
GCFC2-211ENST00000541687 WDR82Q6UXN9 313 aa12.15□□□□□ -0.47
GCFC2-211ENST00000541687 HINT1P49773 126 aaPredicted RBP12.14□□□□□ -0.47
GCFC2-211ENST00000541687 PQLC2Q6ZP29 291 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 C19orf35Q6ZS72 473 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 TUBA4BQ9H853 241 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 ANAPC10Q9UM13 185 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 HIST1H2BKO60814 126 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 HIST1H2BJP06899 126 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 CD59P13987 128 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 HIST1H2BOP23527 126 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 HIST1H2BBP33778 126 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 HIST1H2BDP58876 126 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 HIST1H2BCP62807 126 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 HIST2H2BEQ16778 126 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.14□□□□□ -0.47
GCFC2-211ENST00000541687 OR1L8Q8NGR8 309 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 HIST1H2BHQ93079 126 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 HIST1H2BNQ99877 126 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 HIST1H2BMQ99879 126 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 SLC17A3O00476 420 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 PRB3Q04118 309 aaPredicted RBP12.14□□□□□ -0.47
GCFC2-211ENST00000541687 RNFT1Q5M7Z0 435 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 MS4A5Q9H3V2 200 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 ZDHHC8Q9ULC8 765 aa12.14□□□□□ -0.47
GCFC2-211ENST00000541687 PPIAL4EA0A075B759 164 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 IQCF6A8MYZ5 107 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 PPIAL4DF5H284 164 aa12.13□□□□□ -0.47
GCFC2-211ENST00000541687 PPIHO43447 177 aaKnown RBP12.13□□□□□ -0.47
GCFC2-211ENST00000541687 PPIAL4FP0DN26 164 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms