RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 FAM90A10PA6NDY2 464 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 FAM90A18PA6NE21 464 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 FAM90A16PA6NEW6 464 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 FAM90A20PA6NIJ5 464 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 FAM90A8PA6NJQ4 464 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 FAM90A7PA6NKC0 464 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 ADARB2-AS1A8MUL3 147 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 FAM90A22PA8MWA6 464 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 FAM90A12PA8MX19 464 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 FAM90A5PA8MXJ8 464 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 FAM90A23PA8MXZ1 464 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 FAM90A15PP0C7V4 464 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 FAM90A13PP0C7W8 464 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 FAM90A14PP0C7W9 464 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 FAM90A24PP0C7X0 464 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 LINC00158P58513 81 aa13.15□□□□□ -0.3
HMGA2-210ENST00000541363 MOSP00540 346 aa13.14□□□□□ -0.31
HMGA2-210ENST00000541363 DCAF12L2Q5VW00 463 aa13.14□□□□□ -0.31
HMGA2-210ENST00000541363 NPIPB3Q92617 1050 aa13.14□□□□□ -0.31
HMGA2-210ENST00000541363 SRSF1Q07955 248 aaKnown RBP eCLIP13.14□□□□□ -0.314e-8■■□□□ 13.1
HMGA2-210ENST00000541363 MORN3Q6PF18 240 aaPredicted RBP13.14□□□□□ -0.31
HMGA2-210ENST00000541363 WDYHV1Q96HA8 205 aa13.14□□□□□ -0.31
HMGA2-210ENST00000541363 FAM27BQ5VT28 67 aa13.14□□□□□ -0.31
HMGA2-210ENST00000541363 OR9G4Q8NGQ1 327 aa13.14□□□□□ -0.31
HMGA2-210ENST00000541363 PROB1E7EW31 1015 aa13.14□□□□□ -0.31
HMGA2-210ENST00000541363 PSG4Q00888 419 aa13.14□□□□□ -0.31
HMGA2-210ENST00000541363 ZIC1Q15915 447 aa13.14□□□□□ -0.31
HMGA2-210ENST00000541363 PTGDSP41222 190 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 VKORC1Q9BQB6 163 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 PRR33A8MZF0 331 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 SMAD7O15105 426 aaKnown RBP13.13□□□□□ -0.31
HMGA2-210ENST00000541363 OVOL2Q9BRP0 275 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 RNF115Q9Y4L5 304 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 SVILO95425 2214 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 ZP4Q12836 540 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 C1orf162Q8NEQ5 155 aaPredicted RBP13.13□□□□□ -0.31
HMGA2-210ENST00000541363 HMGCLL1Q8TB92 370 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 GATAD1Q8WUU5 269 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 TNFRSF6BO95407 300 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 CELA2BP08218 269 aaPredicted RBP13.13□□□□□ -0.31
HMGA2-210ENST00000541363 SIGLEC14Q08ET2 396 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 LHFPL4Q7Z7J7 247 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 RPRMQ9NS64 109 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 CHTOPQ9Y3Y2 248 aaKnown RBP13.13□□□□□ -0.31
HMGA2-210ENST00000541363 RP1L1Q8IWN7 2480 aaPredicted RBP13.13□□□□□ -0.31
HMGA2-210ENST00000541363 SMCHD1A6NHR9 2005 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 PLA2G10O15496 165 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 NBEAP1P0C6P0 100 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 KIAA0040Q15053 153 aa13.13□□□□□ -0.31
HMGA2-210ENST00000541363 ZNF660Q6AZW8 331 aaPredicted RBP13.13□□□□□ -0.31
HMGA2-210ENST00000541363 FSTP19883 344 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 LURAP1LQ8IV03 231 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 TCF19Q9Y242 345 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 MCM3APO60318 1980 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 ZIC3O60481 467 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 FBLN7Q53RD9 439 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 ERG28Q9UKR5 140 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 SIRT4Q9Y6E7 314 aaPredicted RBP13.12□□□□□ -0.31
HMGA2-210ENST00000541363 ZNF729A6NN14 1252 aaPredicted RBP13.12□□□□□ -0.31
HMGA2-210ENST00000541363 CD7P09564 240 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 GAGE13Q4V321 117 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 FAM214BQ7L5A3 538 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 GTSCR1Q86UQ5 136 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 TRAV9-1A0A075B6T8 112 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 A0A1W2PPC1 479 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 IGHV3-48P01763 117 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 SSBP2P81877 361 aaPredicted RBP13.12□□□□□ -0.31
HMGA2-210ENST00000541363 ZNF79Q15937 498 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 C2orf68Q2NKX9 166 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 FOCADQ5VW36 1801 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 CD28P10747 220 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 RBMY1FQ15415 496 aaKnown RBP13.12□□□□□ -0.31
HMGA2-210ENST00000541363 RTN4RL2Q86UN3 420 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 IZUMO1RA6ND01 250 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 LINC00587B1AMM8 73 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 SAXO1Q8IYX7 474 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 CIARTQ8N365 385 aaPredicted RBP13.12□□□□□ -0.31
HMGA2-210ENST00000541363 FAM60AQ9NP50 221 aa13.12□□□□□ -0.31
HMGA2-210ENST00000541363 ATAD5Q96QE3 1844 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 TRGV4A0A0C4DH28 118 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 SUMO4Q6EEV6 95 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 PNKDQ8N490 385 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 LEAP2Q969E1 77 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 PTP4A3O75365 173 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 MRAPQ8TCY5 172 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 PLA2G2FQ9BZM2 168 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 TPRP12270 2363 aaKnown RBP13.11□□□□□ -0.31
HMGA2-210ENST00000541363 IGHV3OR16-10A0A075B7F0 116 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 IL6RP08887 468 aaPredicted RBP13.11□□□□□ -0.31
HMGA2-210ENST00000541363 MSRB3Q8IXL7 192 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 FANCMQ8IYD8 2048 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 UPK3AO75631 287 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 NMBP08949 121 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 SCARF2Q96GP6 870 aaPredicted RBP13.11□□□□□ -0.31
HMGA2-210ENST00000541363 IGHV3-49A0A0A0MS15 119 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 IGHV3-35A0A0C4DH35 117 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 ZNF385AQ96PM9 386 aaKnown RBP13.11□□□□□ -0.31
HMGA2-210ENST00000541363 FOXA2Q9Y261 457 aaPredicted RBP13.11□□□□□ -0.31
HMGA2-210ENST00000541363 PQLC2LA1A4F0 135 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 ITGB1BP1O14713 200 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms