RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 C1orf174Q8IYL3 243 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 SIGLECL1Q8N7X8 197 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 OR56B2PQ8NGI1 322 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 DTD1Q8TEA8 209 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 SARAFQ96BY9 339 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 GALMQ96C23 342 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 TBX15Q96SF7 602 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 SFXN3Q9BWM7 321 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 NPCDR1Q9BY65 106 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 MBNL3Q9NUK0 354 aaKnown RBP8.69□□□□□ -1.02
CHFR-219ENST00000541341 IL36BQ9NZH7 164 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 UQCR10Q9UDW1 63 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 CDC42EP3Q9UKI2 254 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 KCNS2Q9ULS6 477 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 NAV3Q8IVL0 2385 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 ACANP16112 2415 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 TRAV39A0A0B4J263 110 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.68□□□□□ -1.02
CHFR-219ENST00000541341 TMEM30CPA0ZSE6 113 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 C5orf63A6NC05 138 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 OOEPA6NGQ2 149 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 H3BP45 60 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 PAGE4O60829 102 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 OR10J4P0C629 311 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 IAPPP10997 89 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 GPM6AP51674 278 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 SUMO1P63165 101 aaKnown RBP8.68□□□□□ -1.02
CHFR-219ENST00000541341 ZNF90Q03938 601 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 RPEL1Q2QD12 228 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 PDLIM3Q53GG5 364 aaPredicted RBP8.68□□□□□ -1.02
CHFR-219ENST00000541341 ZNF497Q6ZNH5 498 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 PNKDQ8N490 385 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 SGMS2Q8NHU3 365 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 DYRK2Q92630 601 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 UCN2Q96RP3 112 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 FOXC2Q99958 501 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 QTRT1Q9BXR0 403 aaKnown RBP8.68□□□□□ -1.02
CHFR-219ENST00000541341 SAMD10Q9BYL1 202 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 GP6Q9HCN6 339 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 ELOVL5Q9NYP7 299 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 MTCH1Q9NZJ7 389 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 WDR83OSQ9Y284 106 aa8.68□□□□□ -1.02
CHFR-219ENST00000541341 CDIPTO14735 213 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 WDR1O75083 606 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 SS18L1O75177 396 aaPredicted RBP8.67□□□□□ -1.02
CHFR-219ENST00000541341 IGKV1-5P01602 117 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 GZMHP20718 246 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 FLNAP21333 2647 aaKnown RBP8.67□□□□□ -1.02
CHFR-219ENST00000541341 MDKP21741 143 aaPredicted RBP8.67□□□□□ -1.02
CHFR-219ENST00000541341 MTORP42345 2549 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 THBS3P49746 956 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 RPS20P60866 119 aaKnown RBP8.67□□□□□ -1.02
CHFR-219ENST00000541341 RHOBP62745 196 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 HTD2P86397 168 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 P2RY6Q15077 328 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 AARDQ4LEZ3 155 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 SLC35E4Q6ICL7 350 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 OR8G2PQ6IF36 304 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 SEM1Q6ZVN7 128 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 C5orf24Q7Z6I8 188 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 BAGE3Q86Y29 109 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 BAGE2Q86Y30 109 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 GCNT2Q8N0V5 402 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 NECAP1Q8NC96 275 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 WFDC11Q8NEX6 87 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 LINC01560Q8TB33 94 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 ORAOV1Q8WV07 137 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 ALKBH3Q96Q83 286 aaPredicted RBP8.67□□□□□ -1.02
CHFR-219ENST00000541341 TMEM208Q9BTX3 173 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 GAL3ST2Q9H3Q3 398 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 TMEM167BQ9NRX6 74 aa8.67□□□□□ -1.02
CHFR-219ENST00000541341 POLR3KQ9Y2Y1 108 aaPredicted RBP8.67□□□□□ -1.02
CHFR-219ENST00000541341 TRGV10A0A0A0MS01 117 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 IGKV1-6A0A0C4DH72 117 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 A6NNC1 897 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 AHRRA9YTQ3 701 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 RBFOX2O43251 390 aaKnown RBP eCLIP8.66□□□□□ -1.029e-12■□□□□ 8.5
CHFR-219ENST00000541341 IL18BPO95998 194 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 HLA-DQA1P01909 254 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 ADH4P08319 380 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 ZNF16P17020 682 aaPredicted RBP8.66□□□□□ -1.02
CHFR-219ENST00000541341 RPL29P47914 159 aaKnown RBP8.66□□□□□ -1.02
CHFR-219ENST00000541341 ZNF146Q15072 292 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 KRTAP21-3Q3LHN1 58 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 ZNF585BQ52M93 769 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 CST9LP1Q5W188 147 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 SSX7Q7RTT5 188 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 IL1F10Q8WWZ1 152 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 C11orf52Q96A22 123 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 CXXC4Q9H2H0 198 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 VSIRQ9H7M9 311 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 SLC25A22Q9H936 323 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 SLC25A10Q9UBX3 287 aaPredicted RBP8.66□□□□□ -1.02
CHFR-219ENST00000541341 SLC45A2Q9UMX9 530 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 PPP1R3CQ9UQK1 317 aa8.66□□□□□ -1.02
CHFR-219ENST00000541341 ABCA4P78363 2273 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 TRAV24A0A0B4J272 114 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 SIRPB1O00241 398 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 TNFSF12O43508 249 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 P0C879 139 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms